Shewanella baltica OS185: Shew185_3161
Help
Entry
Shew185_3161 CDS
T00571
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm00260
Glycine, serine and threonine metabolism
sbm00460
Cyanoamino acid metabolism
sbm00630
Glyoxylate and dicarboxylate metabolism
sbm00670
One carbon pool by folate
sbm00680
Methane metabolism
sbm01100
Metabolic pathways
sbm01110
Biosynthesis of secondary metabolites
sbm01120
Microbial metabolism in diverse environments
sbm01200
Carbon metabolism
sbm01230
Biosynthesis of amino acids
sbm01240
Biosynthesis of cofactors
sbm04981
Folate transport and metabolism
Module
sbm_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Shew185_3161
09102 Energy metabolism
00680 Methane metabolism
Shew185_3161
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Shew185_3161
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Shew185_3161
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Shew185_3161
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Shew185_3161
Enzymes [BR:
sbm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Shew185_3161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ABS09291
UniProt:
A6WR52
LinkDB
All DBs
Position
complement(3769326..3770579)
Genome browser
AA seq
417 aa
AA seq
DB search
MLKKDMNIADYDPELFKAIQNETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVETLAIERAKELFSATYANVQPHSGSQANSAVYMALLKPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIIPYGIDESGKIDYDEMERLAVEHKPKMMIGGFSAYSGI
VDWAKMREIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGVIL
SAADDEDLYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKVYQQQVVNNAKAMVE
VFLERGYKIVSGGTSNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTS
GVRIGTPAITRRGFKEAESKELTGWICDILDDANNPAVIERVKGQVLALCARFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaagatatgaatatcgcagattatgatccggaactgtttaaggcaattcag
aatgaaactctgcgtcaagaagagcatattgagctgattgcttctgaaaactacaccagt
ccacgcgtgatggaagcgcaaggttcacagttaaccaataagtatgctgaaggctatcca
ggcaagcgttactacggtggttgtgagtatgtggacgtagttgaaaccttagcgattgaa
cgtgcgaaagaactgtttagcgcaacttacgctaacgtacaacctcattcaggttcacag
gcaaacagcgctgtttacatggcattgttaaaacctggcgataccgtactgggcatgaac
ttagcccacggtggtcacttaacccacggttcacccgttaacttctctggcaaactgtac
aacatcattccttacggtatcgacgagtcaggtaaaattgactacgacgaaatggaacgt
ctggccgtagaacataagcctaagatgatgatcggcggtttctctgcctattcaggtatc
gttgactgggcaaaaatgcgtgaaattgctgacaaaataggtgcttacctatttgtcgac
atggcgcacgttgccggtcttattgctgctggcgtttatccaaacccagttccacacgca
cacgttgtgacgtcaacgacccacaaaactttagccggtcctcgtggtggcgtgatcctg
tctgctgctgacgatgaagacttgtacaagaagttgaattcagcggtatttccaggcggt
caaggcggcccattaatgcacgttatcgcaggtaaagcggttgcgttcaaagaagcccta
gagccagaatttaaagtgtaccaacagcaagtggttaacaacgctaaagctatggttgaa
gtgttccttgagcgcggttacaaaatcgtctctggcggaaccagcaatcacttgatgcta
gttgatctgattggtcgtgacttaacgggtaaagaagccgatgccgccttaggtagcgct
aacattaccgtgaacaaaaactcagtgccaaacgacccacgttcaccctttgtgacctca
ggtgtgcgtatcggtacgccagccattacgcgccgcggctttaaagaagcggaatcgaaa
gagctgactggctggatttgtgacatccttgatgatgctaacaatcctgcagtgattgag
cgtgttaaaggccaagtattggcactgtgcgcacgtttccctgtttacggttaa
DBGET
integrated database retrieval system
