Shewanella baltica OS185: Shew185_3278
Help
Entry
Shew185_3278 CDS
T00571
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sbm
Shewanella baltica OS185
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbm03016
]
Shew185_3278
Enzymes [BR:
sbm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Shew185_3278
Transfer RNA biogenesis [BR:
sbm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Shew185_3278
Prokaryotic type
Shew185_3278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ABS09405
UniProt:
A6WRG6
LinkDB
All DBs
Position
complement(3908211..3909176)
Genome browser
AA seq
321 aa
AA seq
DB search
MARRPKGRFIDGIVLLDKSTGMSSNFALQRVKRFFNANKAGHTGALDPLATGMLPVCLGE
GTKFSQHLLDADKRYLVTAKLGERTDTSDSDGEVVQTRAIDFTEAQLLTALDFFRGETQQ
VPSMYSALKYQGQPLYKYAREGIEVPRESRPITVFELNFIGLEGDELTLDIHCSKGTYIR
TIIDDLGEMLGCGAHVIMLRRTQVAQYPYARMVSLEQLEALVAQAHEQQIDPSVLLDPLL
LPMDTAVADFPEVNVPDAIAPYLMQGQAVRVPVNADLKTDELVRITLGDIRRFVGIGTMN
EDGLLAPKRLIVIHDEPAETD
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtccaaaaggtcgttttattgatgggatagtgctgctggataaatccacg
ggcatgagttctaactttgcattgcaaagggtaaagcgcttttttaatgcgaacaaagca
gggcatacgggcgcactcgatccgttagcgacaggtatgttacctgtgtgcttaggcgaa
gggactaagttttcccagcatctgttagatgccgataaacgttatttggtcaccgcaaag
ctgggcgagcgaacggataccagtgattccgatggcgaagtggtgcaaacccgcgccatt
gattttactgaagcgcagttattaaccgcgcttgatttcttccgtggtgagactcagcaa
gtgccttctatgtattccgcgcttaaatatcagggccagcccctgtataaatatgcccgt
gaaggcattgaagtgccgcgcgaatctcgccctattacggtatttgagcttaatttcatc
ggtcttgaaggcgatgagctgaccttagacattcattgttctaagggcacttatattcgc
actatcatagacgatctcggtgaaatgctcggttgtggcgcccatgtcatcatgttgcgt
cgcactcaagttgcacaatatccctatgcaagaatggtttccttagaacaacttgaagcg
cttgttgctcaagcacatgaacaacagatagatccgagtgtacttcttgatccgctgtta
ttacctatggatacggctgtggccgatttccctgaggtgaatgtgccggatgcaatcgcc
ccttacttaatgcaaggtcaggctgttcgggtccctgttaatgcagacttgaaaaccgat
gaactggtgcgtatcactttaggtgacattcgccgatttgtggggattggcactatgaac
gaagacggcctactcgcgccgaaacgactcatagtgatccatgacgagccagcagaaact
gattag
DBGET
integrated database retrieval system
