Shewanella baltica OS185: Shew185_3338
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Entry
Shew185_3338 CDS
T00571
Name
(GenBank) glycoside hydrolase family 2 sugar binding
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm00052
Galactose metabolism
sbm00511
Other glycan degradation
sbm00600
Sphingolipid metabolism
sbm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Shew185_3338
09103 Lipid metabolism
00600 Sphingolipid metabolism
Shew185_3338
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Shew185_3338
Enzymes [BR:
sbm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Shew185_3338
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2
Glyco_hydro_2_N
DUF4982
Glyco_hydro_2_N2
Glyco_hydro2_C5
BetaGal_ABD2
PLipase_C_C
Motif
Other DBs
NCBI-ProteinID:
ABS09465
LinkDB
All DBs
Position
complement(3973634..3975979)
Genome browser
AA seq
781 aa
AA seq
DB search
MYFKLLFAIALLCISSVQVQASPQAQTAIKLSFNEDWQFQKSPAHATAFQPEAKAWEKVS
LPHTPKLEPLLVNDQWQGIALYQKQFNAPKSWQGQRLYLRFEGAMNHTKVWLNDKPVGEH
LGGYLPFSIDISAAVNYGADNQLRVALDNNDNPITGPKPLHLLDFNTYGGLYRDVNLFIK
APLHISDEMLTNLPNRGGLVISSKIDDKAKASVAVQADIRNQGSKAAQFTLKQVLEFDGK
VVATIAQSYTLAANSQQVFSQNLTVKQPKLWHPTHPNLYQLQTELWQGNTLLERSSNKVG
IREFAFNAKHELLINGEPYFLRGINRHQDYPHVGYATSKQADYRDAIKIKEAGFDYVRLS
HYPHSPAFMDAADEVGLVLIDAVLGWQYFSPEPEFAEHVYQSCRDLLRRDRNHASVLAWE
CSLNETPMPVAFIDNLKAIIQAELPGAMSAGWQTQYDIYLQARQHRMQHYQTPTQPYNVS
EYGDWEYYAQNAGLNQQAWADLKDDERTSRQLLGAGEKRLLQQAMNLQEAHNDNLHTPAF
ADGYWVMFDYNRGYANDLESSGIMSIYRQPKFSYYLFQSQRDPALTSTQYNAGPMVYIAS
DWQADSSPNVRVYSNADAVELWLNGKLIARQTPDNGANTDKLPHPPFTFHLPSFEAGELS
AKAFIGNQLVATHSVRTPQAIHALEISLDTAGVPINSAGSDVLFVNVRLVDANGTTVPVN
DKVVSFEVNGVIQVLNPDAIVTEKGVASALVRVHNGAKGAHLKASFAAENTAAPLTAELK
F
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcaagttgttgtttgcaatagcattgctgtgtatctccagcgtgcaagtgcag
gcttcgccacaggcgcagactgccatcaaactgtcgttcaacgaagattggcaattccaa
aagtcacccgcccacgctaccgcgtttcagcctgaggctaaagcatgggaaaaagtgagc
ttaccccatacaccaaagcttgaacccctactggtcaatgaccaatggcagggtattgcc
ctgtatcaaaagcaatttaatgctcctaaatcttggcaaggacagcggctttacctgcgt
tttgaaggtgcaatgaaccacactaaagtctggttaaacgataaacctgtgggtgaacat
ttaggcggataccttccttttagcatcgatatttcagctgcggttaattacggtgcggac
aaccagttacgggtggcgttagacaataacgacaatccaattaccggtcctaaaccacta
catttactcgactttaatacctatggtggtttgtaccgcgacgttaatttattcattaaa
gcaccgctgcacatcagcgatgagatgctgacgaatttaccgaaccgtggtggtttagtg
atttcgagcaagatcgacgataaggctaaggcgagtgtggccgttcaggccgatatccgt
aatcaaggcagtaaagcggctcagttcaccttaaaacaggtgcttgagttcgacggtaaa
gtggttgcaacaatagcgcaaagctacactttggcagctaatagccagcaagttttcagc
cagaacttaacggtaaaacagccaaagttatggcatccaacccatccgaatctttatcaa
ttgcagactgaactctggcaaggcaacaccttgctcgagcgaagcagtaataaggtcggt
atccgtgaatttgcctttaatgccaagcatgaattgttgattaacggcgaaccctatttc
ctgcgcggtataaatcgtcatcaagattatccccatgtcggttatgccacctcaaaacaa
gccgattaccgtgatgccatcaagatcaaagaagccggatttgattatgttcgcttatct
cactatccccattcgcccgcctttatggacgccgccgatgaagttgggctagtgctgatt
gatgccgtattaggttggcagtatttctcacctgagcctgagtttgctgagcatgtgtat
cagtcttgcagagatctactgcgccgcgatcgtaaccacgccagcgtgttagcgtgggaa
tgctcgctcaatgaaactccaatgccagtggcctttatcgacaatctgaaagccatcatt
caggcggaacttcctggtgcaatgtctgcaggttggcaaacgcaatacgatatctatctg
caagctcgtcaacatagaatgcagcattatcaaacaccgactcagccatacaatgtgtct
gaatacggcgattgggaatactacgcccaaaatgcaggcctaaaccaacaggcgtgggcc
gatcttaaggatgatgaacgcaccagtcggcagctactcggtgctggtgaaaagcgttta
ctacaacaggcaatgaacctacaggaagcccataacgataatttgcacacgcccgcgttt
gccgacggttattgggtgatgtttgactataaccgtggctatgcgaatgacttagagtcc
tcgggcattatgagcatctatcgtcaacctaagttcagctattacctgttccaaagtcag
cgcgaccccgcgctaacgtcaacccaatacaatgccggacctatggtgtatatcgcctca
gattggcaagcggactcttcgccaaatgttcgggtgtacagtaacgcggatgccgtcgag
ttatggctaaacggcaaattaattgcccgtcaaacacccgataacggcgcgaataccgac
aagttgccccatccaccttttactttccatctgcccagttttgaggcgggagagctaagt
gctaaagcctttattggcaatcagttagtcgcgacgcacagcgttcgtactccccaagcg
attcatgcgcttgagatttcactcgataccgcaggtgtgccgattaattccgctggcagc
gatgtgctgtttgtgaatgtcagattggttgatgccaatggcaccacagtgccagtgaat
gacaaggtggtgagctttgaagtcaatggcgtgattcaagtgctcaatccggatgcgata
gtgacagaaaagggcgttgccagcgcattggtacgagtgcataacggtgcaaaaggcgcg
cacttaaaagcctcttttgcggcagaaaacacagctgcgccgttaactgctgagctgaaa
ttctaa
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