Shewanella baltica OS185: Shew185_3493
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Entry
Shew185_3493 CDS
T00571
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm00630
Glyoxylate and dicarboxylate metabolism
sbm00680
Methane metabolism
sbm01100
Metabolic pathways
sbm01120
Microbial metabolism in diverse environments
sbm01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Shew185_3493
09102 Energy metabolism
00680 Methane metabolism
Shew185_3493
Enzymes [BR:
sbm01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Shew185_3493
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Pyr_redox_3
NAD_binding_8
Fer2_4
Fer4_7
DAO
Fer4
HI0933_like
Fer4_6
Fer4_8
NAD_binding_7
Thi4
FAD_oxidored
GIDA
FAD_binding_3
Amino_oxidase
FAD_binding_2
Fer4_2
AlaDh_PNT_C
Fer4_9
Fer4_18
Fer4_10
Lys_Orn_oxgnase
Fer4_16
Fer4_21
Fer4_Nqo3
Shikimate_DH
Fer4_15
Fer4_17
2-Hacid_dh_C
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
ABS09620
LinkDB
All DBs
Position
4153293..4157570
Genome browser
AA seq
1425 aa
AA seq
DB search
MIELRIDDQVLSVNPTDNLLQVAHAAGIAIPSLCDPSAASQQLGTHAHTHAQADKQACNL
CVVQIENTDASLRCVRACETLVAAGMRVITQSEWLSQQRKQALTAILSDHFADCEAPCQQ
ACPAGVDVQSYLYHIAQGNHTEAVKVIKQTLPLPLSIGRVCPAFCEAQCRRGLVDEPIAI
RQLKRHAADLDLADGEKGGTSYVPPRQADTGKKVAIIGAGPAGLSAGYYLSNQGHSVEIF
EAMPQAGGWLRYGIPEYRLPKAILDKEIELLCHNGLTIHTEMRLGHEVHLNQLVEDFDAV
CLAIGAQKAVPMDYPGSTLKGCYLGVDYLKDHCLDQTLVLGKKVAVIGGGNTAIDCARTA
VREGCDVTLIYRRTRAEMPAEAYEVHEAEVEGVKFHFLTNPIENHSDAQGRVHAVTFAKM
ALGEADASGRRAPVDTGETFTQDFDTVIAAVSQTPDLSFMQDPASPLSQGTLALSRWNTF
IGCEHTMSSGVEKLFVVGDARRGPATAVAAIGDGHKAAIAIDKLLKQGLSCELHANAFNS
AKAISKAVTQDLPATDLYPAVPRKARLTMPELSAVQRLLNYGEVELGFAPDAAMQEAARC
LECACQANTDCKLRDYATDYHVEPKSLNTQSARKFSVDKSSPFIQFDANRCISCGKCVDV
CQLQSGHCAIQFAHDSYQALPQDLSETIERRAPRVGFSASMADSKCVQCGNCVQVCPTGA
LVDARDKRQGDETPPKTASTICTYCGVGCRLDLKIDTSTNQIRHIEGNKESVVNQGMLCV
KGRFGFDFIHSEKRLTTPLIRKNGQLTPSSWPEAITYVAEHLQQIKQQYGSNALASLASA
KATNEENFLLQKFVRSILGTNNIDHCARLCHSSTVTGLQQSIGSGAMTNDIPSIQASDVI
FIIGSDTSSAHPIIASKIKQAVALHGAKLIVADPKRVAIADSAQLYVAHRPGTDVMLLNA
IMAEIIRNDWQDKSYITARTEGVDALYAELAKADYSLKNAALITGVTAEDIACIARTIGT
AEKTAIYYAMGITQHTTGHDNVTAISNLQLLCGNIGVEGAGINPLRGQSNVQGACDMGAL
PNFFSGYQKVTDIHARMRFEAHWQTPLSGEIGVTATHMMHDISKGKIKALYVMGENPVLS
DPDQAHVLRALNAIDFLVVQDIFLTETAELADVVLPAAAFVEKRGHFTNTERRVQRLEQA
LLPPGEALPDWQIVQAIANAMGAAWDYPNEEAIWQEINELTPQYRGITWQRLSTGVDGKI
PQGIQWPCPDETHPGTPIMHQNQFTRGLGKFTPVSYRLPAEMPCSEYPLTLSTGRLLEQF
HTGTLTRKTAGLDLLGSPKVIISVYDAEQLGIGNGDKIKLTTRRGEIEIDAFVTKRAQAG
VLFLPFHFVEAAANKLTINALDPVAFIPEYKVCSVRVERVAEKID
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacttcgaattgatgaccaagtgttgtcggttaacccgaccgataacctactg
caagtggcgcatgccgctggcatagcaatacccagcttatgtgatcccagcgcggcctcg
cagcaattaggcactcatgcacacactcacgcacaagcagacaagcaagcctgcaatttg
tgtgtcgtccaaattgaaaataccgatgccagtttgcgctgcgtacgcgcctgcgaaacg
ctggtcgcagcgggcatgcgggtgataactcagtccgaatggttaagtcaacagcgcaaa
caagcactgacagcgatcttgagcgatcacttcgccgattgtgaagccccgtgccaacaa
gcatgccctgcgggcgtcgatgtgcagagttacctgtatcacatcgcccaaggcaaccat
accgaagccgttaaagtcattaaacaaaccttgccgctgccactgtccattggccgagtt
tgccccgctttttgtgaggcacaatgtcgccgcggactggtcgatgagcccatcgccatt
cgtcaattaaaacgccacgccgctgatctcgatctcgccgatggcgaaaagggcggcacg
agttatgtgccgccacgccaagccgacacgggcaaaaaagtcgcgattattggggcgggc
ccagcaggattaagtgcaggatattacttatcaaaccaaggccatagcgttgagatattc
gaagctatgccacaggctggtggctggctgcgctatggcattcctgaatatcgtttacct
aaggcgatactcgataaagaaatcgaactcttgtgccataacggcttaaccatacacaca
gaaatgcgcctcggccatgaggtgcatttaaatcaattagttgaagatttcgatgccgtc
tgtcttgcgatcggcgcccaaaaagccgtgcctatggattatcccggcagcacactcaaa
ggttgttatttaggcgttgattacttgaaagatcattgcctcgaccagacactcgtactg
ggcaaaaaagtcgccgtcattggtggcggcaatacggctatcgattgcgcccgcactgcg
gtgcgtgaaggctgcgatgtcaccttaatttaccgtcgcacccgcgccgaaatgcccgcc
gaagcttacgaagtacacgaggccgaagtcgaaggggtgaaatttcatttcttaaccaac
ccaattgaaaaccatagcgatgcgcaaggcagagtccacgccgtcacctttgccaaaatg
gcgctcggcgaagcagatgcctctggcagacgcgctcccgttgataccggtgaaaccttt
acccaggattttgatactgtgatagccgcagtatcgcaaactcccgacctgagttttatg
caagatcccgccagccctttaagccaaggcacacttgccctcagccgctggaataccttc
attggctgcgagcacactatgtcatccggggttgaaaagctctttgtggtgggcgatgcg
cgccgcggtcctgccaccgcagttgccgccataggtgatggccataaagccgccatcgcc
atagataaattactcaaacaaggcctaagttgcgagctgcatgccaatgcatttaattcc
gctaaagccatcagcaaagcggtaacacaagacttgcccgcaaccgatctttatcccgcc
gtaccgcgtaaagcccgtttaaccatgcccgaactcagtgcggtgcagcgtttactcaat
tacggcgaagtcgagctaggctttgctcccgatgccgcgatgcaagaagcggcgcgctgc
cttgaatgcgcctgccaagccaatacggattgtaagttaagggactatgcgaccgactac
catgtcgagcctaagtcactcaacactcaaagcgcgcgtaagttttcggtcgataaatcg
agtcctttcattcaatttgatgcgaatcgctgtattagctgcggtaagtgcgttgatgtg
tgccagctacaaagtggccattgtgcgattcaatttgcccatgattcctatcaagcactg
ccgcaagacctaagcgaaaccatcgaacgccgcgcaccgagagtcggctttagcgccagc
atggccgacagtaaatgcgtgcaatgcggcaactgtgtgcaggtttgcccaacaggcgca
ctcgtcgatgcgcgggataaacgccaaggcgatgaaacaccacccaaaaccgcctcaacg
atttgtacctattgcggtgtaggctgtcggcttgaccttaaaatcgataccagcactaat
cagatccgtcatatcgagggcaacaaagagtctgtggttaaccaaggcatgctctgcgtc
aaagggcgatttggtttcgattttattcacagtgaaaaacgcctcaccacgccactcatt
cgtaaaaatggccagctcacgccaagtagttggcctgaagccatcacctatgtggccgaa
catttacagcaaataaaacagcaatatggcagtaatgcactggcaagcttggcctcggca
aaagccaccaatgaagaaaacttcctgctgcaaaaatttgtcagaagcatactcggcacc
aataacatcgaccattgcgcccgtctgtgtcattcatctacggtaacaggcctgcagcaa
agtatcggcagtggtgccatgaccaatgacattccgagcattcaagcatcggatgtgatt
tttatcataggctcagacaccagcagtgctcacccgatcatcgcctcgaaaattaagcaa
gccgtggctttgcatggtgcaaaattaatagtggccgaccctaaacgtgtcgccattgcc
gacagtgcacagctttatgtcgcccacagacccggcactgacgtcatgttactcaatgcg
attatggcggaaatcatccgcaacgactggcaggataaaagctacattaccgcacgcacc
gaaggagtcgatgccctctacgctgaactcgcaaaagcagattacagtctaaaaaacgcg
gccttgataactggcgttacagccgaagatatcgcctgtatcgcccgcaccataggcacg
gctgagaaaaccgcaatctactatgcaatggggatcactcagcacacgacgggacacgac
aatgtcaccgccatatccaatctacaacttctatgcggtaatattggggttgaaggtgcg
gggattaacccactgcgggggcaaagtaatgtgcaaggtgcctgcgacatgggcgcactg
cctaacttcttcagtggctaccaaaaagtcaccgacattcatgccagaatgcgtttcgag
gcacactggcaaacgccgttatcgggggagattggcgtaaccgcaacccacatgatgcat
gatatttccaaaggaaaaatcaaagctttgtatgtgatgggcgaaaaccccgtattgagc
gatcctgaccaagcccatgtgcttagggcgcttaatgcaatcgactttttagtggtgcag
gatatcttcctcaccgaaaccgccgagcttgccgatgtggttctgcccgccgccgccttt
gtcgaaaaacgtggtcatttcaccaatactgaacgacgagtgcagcgactcgaacaagct
ctgttaccgccaggtgaagccctgcccgattggcaaattgtccaagctattgccaatgcg
atgggtgccgcttgggattaccccaatgaagaagcgatttggcaggagatcaatgagcta
acaccacaatatcgcggcattacttggcaacgattaagcactggagttgacggtaaaatc
ccccaaggtattcaatggccatgtccagacgaaacccatcctggtactcccattatgcac
caaaatcaattcacccgcggcttaggtaagttcacgccagtgagttatcgcttacccgca
gaaatgccctgcagtgagtacccgctcaccctctcgaccggacgtttactggaacagttc
cacacaggcaccttaacccgtaaaacagcggggctcgacttactcggctcgcctaaagtg
ataatttcagtctatgacgctgagcaactcgggataggcaatggcgataaaatcaaactc
actacccgtcgcggcgaaattgaaatcgacgcctttgtgacgaaaagagcgcaagctggc
gtgctattcctgcccttccattttgttgaagcggcggcgaataaactcaccatcaatgcg
ctcgatcctgtcgcttttatcccagaatataaggtctgctctgtgagggtagaacgggtt
gccgagaagattgattaa
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