Shewanella baltica OS185: Shew185_3664
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Entry
Shew185_3664 CDS
T00571
Name
(GenBank) protein of unknown function DUF181
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
sbm
Shewanella baltica OS185
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbm03009
]
Shew185_3664
Ribosome biogenesis [BR:
sbm03009
]
Prokaryotic type
ribosomal protein modification factors
Shew185_3664
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
GNA1162-like
Motif
Other DBs
NCBI-ProteinID:
ABS09789
LinkDB
All DBs
Position
complement(4354204..4356393)
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AA seq
729 aa
AA seq
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MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCK
ARDIPTDNIRLSQNNIVDPEDRYNQIFQIQVELPEDISDKDREGILRSIDRCTVKKVVQT
GPEFKIETVENLDADANAMLMGQPNGASSTFILGKDLPLEQTIANMTGMLADLGMKIEIS
SWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNNNFFYNDQFFGTE
IANSEFVHYPNEKWFALEEDDALPAGILDDYCLEIYNPDDELCGSHLIDTNSGNVKRGIC
AIPYTRKSNGETVYFPSNLIENLFLSNGMSAGNNLQEAHVQCLSEIFERAVKRQIIEQEI
VLPDVPMSVLEKYPSILAGIKGLEEQGFPVVVKDASLGGQFPVMCVTLMNPKTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVSEPENFVEHFIDSTGVISWRF
FSSKFDYEFCEWDFSGTSEEEADGLFGILEALGKEVYIAEFTDLGASACRILVPDYSEIY
PVDDLIWDNTNKALAYREDILNLHSLSTKQLANLVNRLEESQLDNYTDIRTLIGIVFDEN
TVWGQLTIIELKILIYLALGAHEDAIELVGEFLQFNDNTVKRGLFYQAMNAVLEVTLDDE
LELDDFIHNFNRMFGKEVMDNVVGSVTGKVRFYGLTKTSMQLEGIEPHLRLIESYKKLHQ
ARKAAKDLN
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagttaattttctcgacaatcttagacttgaagccaagtttgatgatttt
accgtgaccgccgatcaaccgatccgctacaaaggtgatggttctgctcctagtccgttt
gattatttcttagcgtcgtcagccctgtgtgcggcctatttcgtgaaggtgtattgcaaa
gcccgcgatattccaacggataacatcagactgtcgcagaacaatattgtcgatccagaa
gatcgctacaaccagattttccaaattcaggttgaattgccagaagatatttccgataaa
gatcgcgaaggtattttgcgttcaattgaccgttgtaccgttaaaaaagtggtgcaaacg
ggtccagaatttaagattgaaaccgttgaaaacctagacgcagacgccaatgctatgctg
atgggccagcctaatggcgcctcgagcacctttattctgggtaaagatctgccgctggag
cagaccattgcgaatatgacgggaatgctcgccgatcttggaatgaagattgagatctca
tcatggcgtaacatagtgccgaacgtctggtcactgcatattcgtgacgccgcttcgccc
atgtgttttaccaatggtaaaggcgcgaccaaagaaagcgcactgtgctcggcactcggc
gagtttattgagaggttaaataacaactttttctataatgatcaattctttggtaccgaa
atcgctaatagcgaatttgtgcattatcccaatgaaaagtggtttgcgttagaagaagac
gatgcgctgccagcgggaattctggatgactattgtttagagatttataacccagacgat
gagctgtgcggttcgcacttgattgataccaactcaggtaatgttaagcgcggtatctgt
gcgattccttacacccgtaaatctaacggtgaaacggtttatttcccatcgaacctgatt
gaaaacttgttcttaagcaatggcatgagtgcgggtaataacctgcaagaagcccatgta
cagtgcttgtcagagattttcgagcgtgccgttaaacgtcaaatcattgagcaagaaatt
gtattgccagatgtgcctatgtctgtactcgaaaagtacccaagcatcctcgcaggcatt
aagggcttagaagagcagggcttcccggttgtggtcaaagatgcctcactcggcggccag
ttccctgtgatgtgcgtgaccctgatgaacccgaaaaccggcggcgtgtttgcctcattt
ggcgcgcacccaagctttgaagtggcattagagcgcagcttaactgagctgttgcaaggc
cgtagcttcgaaggcttaaacgacgtgccaaaaccaacctttaacagcatggcggtcagc
gagccagaaaactttgttgagcattttattgattcaacaggagtgatttcatggcgcttc
tttagcagtaaatttgattatgaattctgcgaatgggatttctctggcaccagcgaagaa
gaagccgacggcctgtttggcatcttagaagcgttaggtaaagaggtgtatatcgccgag
tttaccgatttaggcgcatcggcgtgccgtattttagttcctgattattcggagatttat
ccagtcgatgatttgatttgggataataccaacaaggcgctggcgtaccgtgaagatatt
ctaaatctgcattcgttaagcactaagcaattggctaatttggtcaatcgtttagaagaa
agccaactcgataactatacggatattcgcaccttaatcggcattgtatttgatgaaaat
accgtttggggtcagctcacgattatcgagcttaagatcctgatttatttggcactcggt
gcacacgaagacgcgattgagctggtcggcgagttcctgcagtttaacgacaataccgtt
aaacgcggcctgttctaccaagctatgaatgctgtattggaagtgactttagatgacgag
ctagaacttgatgattttatccacaacttcaaccgcatgttcggtaaagaagtgatggac
aatgtcgttggctcagtcacaggtaaagtgcgtttttatggcctaacaaagaccagcatg
cagctcgaaggcattgagccacatctaagattgattgaaagctataaaaagctgcatcaa
gcccgtaaagctgcgaaagatctgaattaa
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