Shewanella baltica OS185: Shew185_3767
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Entry
Shew185_3767 CDS
T00571
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
sbm
Shewanella baltica OS185
Pathway
sbm02024
Quorum sensing
sbm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Shew185_3767
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Shew185_3767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbm03019
]
Shew185_3767
03036 Chromosome and associated proteins [BR:
sbm03036
]
Shew185_3767
Messenger RNA biogenesis [BR:
sbm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Shew185_3767
Chromosome and associated proteins [BR:
sbm03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Shew185_3767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ABS09891
UniProt:
A6WSV2
LinkDB
All DBs
Position
complement(4476123..4476395)
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AA seq
90 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAIS
TVVPARPFNVTGHQNAQGGYGAQDDAPSGE
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttacaagacccatttttgaacgcattgcgtcgcgagcgcgtt
cctgtatcaatttacttggtgaacggcattaaactccaaggacaggtagagtcgtttgat
caatttgtcattctgttgaaaaacacagtgagccaaatggtttataaacacgctatttct
actgtcgtgccagcacgcccattcaacgtcactggtcaccaaaatgcccaaggcggatat
ggtgctcaagatgatgcgcctagtggcgaataa
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