Shewanella baltica OS185: Shew185_3899
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Entry
Shew185_3899 CDS
T00571
Name
(GenBank) protein of unknown function DUF853 NPT hydrolase putative
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sbm
Shewanella baltica OS185
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbm03400
]
Shew185_3899
DNA repair and recombination proteins [BR:
sbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Shew185_3899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
ResIII
AAA_22
TrwB_AAD_bind
AAA_25
AAA_16
AAA_30
CbiA
T2SSE
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ABS10023
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Position
4624028..4625542
Genome browser
AA seq
504 aa
AA seq
DB search
MPLNTLFIGKGDQQVHLNLKYANRHGLIAGATGTGKTVSLMSLAEGFSRQGVPVFITDVK
GDISGLAMAGTPNEKLLQRAAQIGIEDYHNEANPVVLWDLAGVQGHPLRTTISEMGPTLL
SRMLELNDTQSGILDIVFQLADDQGLLLLDLDDLRAMLALVAEERKEVSAKYGLISAQSL
AAIQRSVLGLERDGGKDFFGEPALQLEDLMRTNLQGRGIINLLAANKLILTPRLYSSFLL
WLLSELFENLPEVGDPEKPKLVFFIDEAHLLFEGCPPSLLKRVEQIMRLIRSKGVGVYFC
SQFPDDVPSEILGQLGNRIQHALRAYTPRDQKAVKTAAETFVPNPKLVVSEVISQLGVGE
ALVSMLADKGVPTMVERALIAPPRCRMGPATSEELHQVRAQSSIGGKYDHAINRESAYEL
LNQRRTGVATSNPTSTASNTANDGQTGQKAEEQGWFSELIFGNKRRQGLAETLSKQAART
VGSQLGKQILRGILGGMLGKSSRR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcccttgaatactctatttattgggaaaggtgatcaacaggttcacttaaatcttaag
tatgctaatcgtcatggattaattgccggcgccactgggacaggcaaaaccgtgtcgctg
atgagcctagccgaaggtttttcgcgccaaggcgtgccggtttttatcacggatgttaaa
ggtgatatctcaggcctagcgatggcgggcaccccaaatgaaaagctgttacaaagggcg
gcgcaaattggcatagaggattatcacaacgaagccaaccctgtggtgttatgggattta
gcgggcgttcaaggccatccactgcgtaccaccatcagcgaaatgggcccaaccttactc
agccgaatgttagaattaaatgacacccaaagcggtatcttagacatagtgtttcaactg
gcagacgaccaagggttattattgctcgacttagatgatctgcgggccatgctggctttg
gttgccgaggaacgcaaagaagtctccgccaaatatggtttgatcagcgcccaatccctc
gcggcgattcagcgctcagtgctaggacttgagcgcgatggcggcaaagacttttttggc
gaacccgcgttacagcttgaagatttaatgcgcactaatttgcaagggcgcggcatcatc
aatttgttagcggcgaataaactgattttaacgccacgtttatattcaagttttttactc
tggctactgtcagaattatttgagaatttgcccgaagtcggcgatcccgaaaaacctaaa
ctcgtgttctttattgatgaagcccatttactctttgaaggttgcccaccgagtttatta
aaacgcgtcgaacagatcatgcgccttattcgctcaaaaggcgtaggcgtttatttttgt
tcgcaatttcctgatgatgtgccgagtgaaattctcgggcaattaggtaatcgcattcaa
catgccctgcgagcttacacgccaagagatcaaaaggccgttaaaaccgccgccgaaacc
tttgtgcctaaccccaaactggtagtcagtgaggttatttcccagctcggcgtgggcgag
gccttagtgtctatgctggccgacaagggcgtgccgactatggtcgagcgcgcactcatc
gcaccgccgcgttgtcgaatgggacccgccacgagtgaggaattacaccaagtccgcgcc
caaagctcgattggtggcaaatacgatcatgccatcaaccgcgaatcggcctacgaactg
cttaaccaaagacgtaccggcgttgccaccagcaaccccacatccacagcaagtaataca
gcaaatgatggccaaacgggtcagaaagccgaagaacaaggttggttcagtgaacttatt
tttggtaataaacgccgccaaggtttagcggagaccttgtccaagcaagcagcacgcact
gtcggcagccaattaggtaaacaaattttgcgcggcatattaggcgggatgttaggtaaa
tcgagccgacgctag
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