Shewanella baltica OS185: Shew185_3943
Help
Entry
Shew185_3943 CDS
T00571
Name
(GenBank) type II secretion system protein
KO
K02653
type IV pilus assembly protein PilC
Organism
sbm
Shewanella baltica OS185
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sbm02044
]
Shew185_3943
02035 Bacterial motility proteins [BR:
sbm02035
]
Shew185_3943
Secretion system [BR:
sbm02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Shew185_3943
Bacterial motility proteins [BR:
sbm02035
]
Pilus system
Pilus assembly proteins
Shew185_3943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
Motif
Other DBs
NCBI-ProteinID:
ABS10064
LinkDB
All DBs
Position
4690431..4691702
Genome browser
AA seq
423 aa
AA seq
DB search
MATATTTRKPRTKKAEQKSQSKIYTFEWKGVNRDGKKTAGELRGATAAEIRSQLKSQGVN
PKSVRKQSSPLFKLGDASITPMDIAMMTRQIATMLAAGVPLVTTIELLGRGHEKAKMREL
LANILSEIQSGIPLSDAMRPHRRYFDELYVDLVAAGEHSGSLDLVFDRVATYREKTEALK
SKIKKAMFYPAAVVIVAILVTTLLLLFVVPQFEDIFKGFGAELPAFTQLVLHISRGLQSS
WYIFLAAIVGGVFLFVRAHRNSQILRDRVDEAVLKIPAIGPILHKGAMARFARTLATTFA
AGVPLIDGLESAAGASGNAVYRKAILKIRQEVMAGMQMNVAMQTTGLFPDMLVQMVMIGE
ESGSLDNMLNKVSTIYEMQVDDAVDGLSSLIEPIMMVVIGTVVGGLIVAMYLPIFQMGNI
VGG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctacggcaacgaccacaagaaagcctcgcaccaagaaagccgagcaaaaaagccaa
tccaaaatctatactttcgaatggaaaggtgttaatcgcgacggcaagaaaaccgcaggt
gaactcagaggcgcaactgccgccgaaatccgtagtcagttaaaatcccaaggagttaac
cctaagagcgttcgtaagcaatcttctccgctctttaagctaggtgatgccagtattacc
cctatggatattgctatgatgactcgccaaatcgcgactatgctagcggcgggcgtacct
ttagtcaccacaattgaactactcggccgcggccacgaaaaagctaagatgcgtgaatta
cttgcaaatattctcagcgaaattcaatcaggcattcccttatccgatgcgatgcgccct
cataggcgttacttcgatgagctatatgttgacctagttgcagcaggtgaacattctggt
tcactagacttggtcttcgatcgtgttgctacttatagagaaaaaacggaagcactcaaa
tcaaaaattaagaaggccatgttctatcccgccgctgttgtcatagtcgcgatattagta
acaaccttattattactctttgtcgtcccacagtttgaagacatcttcaaaggctttggg
gctgaactgcccgcctttacccaactggtgctgcatatttcccgcggcttacaatcctct
tggtatatctttttagctgccattgtaggcggagtatttttattcgttagagcccacaga
aactcccaaattttacgtgatagagtcgatgaagctgtacttaaaatcccagccattggg
ccgattttacacaaaggagccatggctcgattcgcccggactttagcgactaccttcgcc
gcgggtgtgccactcattgatggcttagaatccgcagctggcgcatcgggtaacgcggta
taccgcaaagctattttaaaaattcgtcaagaagtcatggcggggatgcagatgaatgtg
gctatgcagaccacaggacttttccccgatatgttagtgcaaatggtgatgataggcgaa
gaatccggctcactggataacatgctcaataaagtatcaaccatttacgaaatgcaagta
gatgatgcggttgatggcttatcaagcctgatagaaccgattatgatggtggtcatcggc
actgtcgtcggcggtttaatcgttgctatgtatctacctatattccaaatgggtaatatt
gtaggcggctag
DBGET
integrated database retrieval system
