Shewanella baltica OS185: Shew185_3960
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Entry
Shew185_3960 CDS
T00571
Name
(GenBank) succinate dehydrogenase or fumarate reductase, flavoprotein subunit
KO
K00233
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
7.1.1.12
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm00020
Citrate cycle (TCA cycle)
sbm00190
Oxidative phosphorylation
sbm00620
Pyruvate metabolism
sbm00650
Butanoate metabolism
sbm00720
Other carbon fixation pathways
sbm01100
Metabolic pathways
sbm01110
Biosynthesis of secondary metabolites
sbm01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Shew185_3960
00620 Pyruvate metabolism
Shew185_3960
00650 Butanoate metabolism
Shew185_3960
09102 Energy metabolism
00190 Oxidative phosphorylation
Shew185_3960
00720 Other carbon fixation pathways
Shew185_3960
Enzymes [BR:
sbm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Shew185_3960
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.12 succinate dehydrogenase (electrogenic, proton-motive force generating)
Shew185_3960
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
FAD_oxidored
NAD_binding_8
Pyr_redox_2
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
ABS10081
LinkDB
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Position
complement(4708219..4710225)
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AA seq
668 aa
AA seq
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MKLIYTDSLVVGAGLAGLRVAIASKERGLDTLVLSLIPAKRSHSAAAQGGMQASLGNAVK
GMGDDEDVHFQDTVKGSDWGCDQDVARMFAHCAPKAVRELATWGVPWSRVSAGPREVIVN
AQKVTLHEAQEAHGLINARDFGGTKKWRTCYTADGTGHSLLYAMDNKAISMDIPVHERIE
ALALIHDGKRCHGVIARCLITGELRAYVAKSTTIATGGYGRIYEVSTNAIICEGIGQALA
LETGVARLGNMEAVQFHPTAIVPVGILTTEGCRGDGGLLRDKDGYRFMPDYEPDKKELAS
RDVVSRRMTEHIRKGKGVDSPYGPHLWLDITLLGRKHIETNLREVQEICENFLGIDPAKD
WIPVRPTQHYSMGGIRTNATGESPQLKGLFSVGEAACWDMHGFNRLGGNSLAETVVGGMI
IGKYVADFCENNSLEIDTQLAERFMQQVQSEIDLLIEGDGHESAFALKREMQRIMMDYVG
IFRNGPELDKAVAELKVLLERSRKLGLKCKKRHTNPELVEALRVKRMLKVALTVACGAAA
RTESRGAHAREDYPQRNDRDWLNRTLASWPDPDALEPVLNYESLDVMKMELPPGYRGYGI
NNAIVHPDTEKREQQIANILAELGDDADRYQRQRALMPFELPESLQPNNERLSDNLKSPS
ANALGEKS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactgatttataccgattcattagtagtaggcgccggacttgcaggcttaagggtc
gccatcgcctccaaagagcgggggctcgataccttagtcctctcactcattcctgcgaaa
cgctcccactcagctgctgcccaaggcggtatgcaggcgagcttaggcaatgccgtaaaa
ggcatgggcgatgatgaagatgtgcattttcaagatacggtaaaaggttccgactggggc
tgcgatcaagatgtggcgcggatgtttgctcactgtgcgcccaaggctgtgcgtgaatta
gcgacgtggggcgtgccttggtcaagggtgagtgcaggcccaagagaggtgattgtgaac
gcgcaaaaagtgacgctgcatgaggcgcaggaagcccatggactgattaacgcccgtgac
tttggcggcacaaaaaaatggcgcacttgctacacggccgatggtacgggtcattcgctg
ttatacgctatggataacaaagcgatttctatggatattcccgtccatgaacgtatcgaa
gcgctggcactgattcacgatggtaaacgttgccatggggtgatcgcccgctgtttgata
accggtgaactcagggcctatgtggctaagtccaccaccatcgccactggcggatatggc
cgcatttatgaagtgtcgaccaatgcgatcatctgcgaaggcattggtcaagcactcgcg
ttagaaacaggcgtggcaaggcttggcaatatggaagcggtacaattccatccgactgct
atcgtgcccgtgggcattttaactacagaagggtgccgtggtgatggcggcttattgcgc
gataaagacggttaccgttttatgccagactatgagcccgataaaaaagagttggcatcg
cgggatgtggtatcgcgccgcatgacagaacacatacgtaaaggtaagggcgtcgatagc
ccctatgggccgcatttgtggctggatattaccctgttaggtcgcaagcacatcgaaact
aaccttagggaagtgcaggaaatttgtgagaacttcctcggtatcgatcccgctaaggat
tggatcccagtacggccaacgcagcattattccatgggcggcattcgaaccaatgctacg
ggtgaaagcccgcagcttaaaggcttgtttagcgtcggcgaagcggcgtgttgggacatg
cacggttttaaccgtttaggcggtaattcgttggccgaaaccgtggttggcggcatgatt
attggtaaatatgtcgccgatttctgtgagaacaatagcctagagatagacactcagctt
gctgaacgctttatgcagcaggtgcagagtgaaattgatctgctgatcgaaggtgatggc
cacgagagcgcctttgccctcaaacgtgaaatgcagcgcattatgatggattatgtgggg
attttccgtaatggccctgagcttgataaagcggttgccgagctaaaagtgctgctcgaa
cgttcgcgtaagcttgggcttaagtgtaaaaagcgtcacaccaatcctgagctggtcgaa
gccctgcgggttaagcgcatgctcaaagtagcgctgactgtggcctgcggcgcagcggca
cgaaccgaaagtcgtggtgcccatgctcgagaagattatccacagcgaaatgatcgagac
tggctaaatcgtaccttagccagttggccggatcccgatgcgctcgaacctgtgcttaat
tacgaatcactcgatgtgatgaagatggaactcccgccgggttatcgtggctatggtatt
aacaacgccatagtgcaccccgataccgaaaaacgtgaacagcagattgccaatatttta
gccgagctaggcgatgatgctgaccgttatcaacgccagcgggcacttatgccctttgaa
ttacccgaaagcttacaacctaataatgaacgtttaagtgataatttaaaaagcccgtcc
gccaatgcgttaggagaaaaatcataa
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