Shewanella baltica OS185: Shew185_3973
Help
Entry
Shew185_3973 CDS
T00571
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm00300
Lysine biosynthesis
sbm00470
D-Amino acid metabolism
sbm01100
Metabolic pathways
sbm01110
Biosynthesis of secondary metabolites
sbm01120
Microbial metabolism in diverse environments
sbm01230
Biosynthesis of amino acids
Module
sbm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Shew185_3973
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Shew185_3973
Enzymes [BR:
sbm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Shew185_3973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
ABS10094
UniProt:
A6WTF5
LinkDB
All DBs
Position
complement(4722703..4723530)
Genome browser
AA seq
275 aa
AA seq
DB search
MIQFTKMHGLGNDFMVVDGVTQNVFFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFH
YRIFNADGTEVEQCGNGARCFARFVRNKGLTNKSKIRVSTSSGKMTLRLERDGTVTVNMG
VPILEPSQIPFKAKKPEKTYLLQTPMQTFLCGAASMGNPHCVLDVEDVASASVAEIGAML
TKHERFPRGVNVGFMQVVDSGHIKLRVYERGAAETLACGTGACAAVVVGQVQGKLGQQVR
VDLPGGTLTINWEGEGKPLWMTGPAQHVYDGQIQL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
ttgatccaattcactaagatgcacggactgggcaacgattttatggtggtcgatggggtc
acgcagaacgtgttcttttcgcctgagcagatccgccgtttagccgaccgtaactttggc
ataggtttcgaccaactactcttagttgagccgccctatgatcccgatttagattttcat
tatcgcatcttcaatgccgatggcactgaagtcgaacaatgcggcaatggcgcccgctgt
ttcgctcgttttgtgcgtaataaaggcctgacaaataagagcaaaatccgtgtcagtact
tcgtctggcaagatgactctgcgcttagagcgagacggtactgttaccgtgaatatgggc
gtgccgatcctcgaaccgagtcagatccccttcaaagccaagaaacctgaaaaaacctat
ttactgcaaacaccgatgcaaacctttttatgtggcgcggcttctatgggtaatccccat
tgcgtgctcgacgttgaagatgtggcgagtgcttctgttgctgaaattggtgccatgctc
actaagcatgagcgttttccgcgcggcgtgaatgtggggtttatgcaggtcgtagactcc
ggccacattaagctgcgggtgtatgagcgcggcgcggccgaaaccttggcctgtggcaca
ggcgcatgtgcagctgtagttgtgggtcaagtgcaaggaaagctcggccagcaagtgcgg
gtggatttacccggcggcaccttaaccatcaactgggaaggcgagggtaaacctttgtgg
atgacgggccccgcgcagcacgtttacgatggacaaattcagttatga
DBGET
integrated database retrieval system