Shewanella baltica OS185: Shew185_3974
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Entry
Shew185_3974 CDS
T00571
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm00300
Lysine biosynthesis
sbm00470
D-Amino acid metabolism
sbm01100
Metabolic pathways
sbm01110
Biosynthesis of secondary metabolites
sbm01120
Microbial metabolism in diverse environments
sbm01230
Biosynthesis of amino acids
Module
sbm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Shew185_3974
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Shew185_3974
Enzymes [BR:
sbm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Shew185_3974
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ABS10095
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Position
complement(4723607..4724851)
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AA seq
414 aa
AA seq
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MDHFLYQQNALHAEGCQVAYLAQTYGTPLYIYSRATLERHWHAFNNAVADHPHLICYAVK
ANANLAVLNVLARLGSGFDIVSGGELARVMEAGGDPAKVVFSGVGKTAAEMEQALNLGIY
CFNVESSAELEQLNLVAGRLGKVAPVSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEI
VFARAHALPHLKVKGVDCHIGSQLTEIKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGL
GVTYDAETPPHPDVYAAAILARLGDRQLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRF
AIVDGAMNDLIRPALYSAWQNIIPVVPRDSEAYEFDIVGPVCETGDFLGKNRQLALAAGD
LLAVRSSGAYGFAMASNYNTRPRAAEVMVDGEQAFLVREREKLSQLWQGEQLLP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttggatcactttctctaccaacaaaatgccctgcacgccgaaggctgccaggttgcctat
ttagctcaaacctatggcacaccgctgtatatctattcccgcgccacgctagagcgccat
tggcatgcctttaataatgccgtggcagatcatccacatttgatttgttacgcggttaaa
gccaatgcgaacttggctgtactgaatgtgctggcacgtttaggcagtggttttgatatc
gtgtcgggcggtgagttagcaagagtgatggaagcgggcggcgatcccgccaaagtggtg
ttctctggcgtgggtaaaactgcggctgaaatggaacaggcacttaatctgggcatttat
tgctttaacgttgaatcgagtgctgagcttgagcagttaaatctggtcgctggtcgttta
ggtaaagtggcgcctgtgtccctgcggattaatcccgatgttgatgctggaacccatccc
tacatttcgactggccttaaagaaaacaaattcggtattgctatggatgaggctgaaatc
gttttcgcccgtgcccatgcgttgccacatttaaaagtgaaaggtgtcgattgccatatc
ggctcacaactgactgaaatcaaaccattcctcgatgcgatggatcgtatgctcgccttg
atcgaccgtttggccgagcagggtatcgttattgagcatttcgatgtgggtggtggttta
ggggtgacctatgatgccgaaacgccgccacatcctgatgtgtatgctgccgccatattg
gcgcgtttgggcgaccgtcaactgaagctgatcttcgaaccgggccgtgcgattgccgcc
aatgcggggatttttgttactcaggtgctgtatcttaaagaaaacagcgacaaacgtttt
gcgattgtcgatggtgcgatgaatgacttgattcgtcccgcactctacagtgcatggcaa
aatattatcccagtcgtgccaagggactcagaagcctatgagtttgatattgttggccca
gtgtgcgaaaccggtgactttttaggtaaaaatcgccagctcgcgttagccgcgggtgat
ttactggcggtgcgttcgagtggtgcctatggttttgccatggcctctaactacaacacg
cgtcctcgtgcggctgaagtgatggtggatggtgagcaggctttcttagtgcgtgagcga
gaaaaattgtctcagctctggcaaggtgagcaactcctgccgtaa
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