Shewanella baltica OS185: Shew185_3983
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Entry
Shew185_3983 CDS
T00571
Name
(GenBank) ABC transporter related
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
sbm
Shewanella baltica OS185
Pathway
sbm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Shew185_3983
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbm02000
]
Shew185_3983
02044 Secretion system [BR:
sbm02044
]
Shew185_3983
Transporters [BR:
sbm02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Shew185_3983
Secretion system [BR:
sbm02044
]
Type I secretion system
Adhesin protein transporter
Shew185_3983
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
Peptidase_C39
AAA_15
AAA_29
AAA_13
AAA_22
MMR_HSR1
DUF87
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ABS10104
LinkDB
All DBs
Position
4752837..4755014
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AA seq
725 aa
AA seq
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MSAAASEKIDQWTISASQRVLVDPLLDCLVLLTEHFGNPCSSDSLAAGLPLSGAVLTPDL
LPQAASRAGLAAKLSRKGLNEVSPILLPCILLLKDKKACILRELDVESDKAIIQLPETGG
EETLTIESLEALYVGYLFLVKQEYRGDMGFDVYLHDNKTHWLVQTLKDSAPIYRDALIAS
VLVNLFALVSPLFIMNVYDKVVPNLAFESLWVLAIGASIAYLFDLVMRQLRSYLIDVAGK
KVDIIVSSRLFAKAIGIPLEKRSPSIGGMAKQLGEFDNIREILTSATITTLVDLPFAVFF
LIIIYIVAGDLAIVPVIGGAIIIGFTLYIQPKLKAAIEEGNKFSSLKHGHLIESLSALES
IKANGAEGIVQKSWQQMIGHSANWQLRSKKLSNSVSNVANFTVQFTVVCVVILGVYRVAD
NAISMGGIIAAVMLSSRAISPMAQLAGLMTRANHTASALRQLNEIMTQEDEFENKGHLVS
KQRLIGKINADHVGFGYPGSEKPVLHPMSLTINPGERIAIIGRNGSGKSTLAKLLVGLFQ
PTAGSLRYDGLDSAQIHPSDLRRNFGYLPQDVTLFHGSIRDNILFGTRQVTEHQLIRAVQ
LSGVSQFTNLEAEGLDQQVGEGGMSLSRGQRQTVALARATLNDPPVLLMDEPTASLDARA
EQQFIRSMQNVSKDRTLILITHKMHLLQLVDRIIVLERGHVVADGPKAEVLEKLNFGLVN
GEAKR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagctgcagcttctgaaaaaattgaccaatggaccatttcagcctcgcaaagagtc
ttagtggacccgctgctggattgtttagtgttactcactgagcattttggcaacccgtgc
tcgagcgactcgcttgcggcaggtttacctttgtcaggtgcggtattaacacccgattta
ttgcctcaggccgcatcgagagctggcctagcggcgaagttatctcgaaaaggcttaaac
gaagtatcacccatattgcttccttgcattttgttattaaaagacaagaaagcctgcata
ttgcgtgaactcgatgttgagtccgataaagcgattattcaattacccgagacaggtggt
gaagagacgctgacaattgagtcgctcgaagctttatatgtgggatatttattcttagtt
aaacaagaataccgtggtgacatgggctttgatgtttatctacacgataataaaacccac
tggctagtccaaaccctaaaagattctgcgcccatttatcgcgatgcattaatcgcttct
gtattagtgaatttgttcgccttagtttcacctttatttatcatgaatgtgtatgacaaa
gtcgtgcccaatcttgcctttgaatccctgtgggtgttagcgattggcgcttctattgct
tatttatttgatcttgtcatgcgtcaactcagaagctacctgattgatgtagcaggtaaa
aaagtagacatcatagtatcttctcgcctcttcgctaaagcaattggtatccccttagaa
aaacgctcccccagtattggcggtatggcaaaacaattaggcgaattcgataacatccgt
gagattttaacctcggcgacgatcacaactttagtcgatctgccctttgcggtatttttc
ttaattattatctacatcgttgctggcgatctcgccattgttccagtgatcggtggcgcc
atcattattggctttacgctttatattcaacctaaactcaaagccgctatcgaagaaggc
aataaattttcaagcctgaaacatgggcatttaatcgagagtttatcggcactagagtca
atcaaagccaatggtgccgaaggtatagtacaaaaaagctggcaacaaatgataggccac
agtgccaactggcaattaaggtcaaaaaagctatctaactcagtatcgaacgtggctaac
ttcacagtgcaatttaccgttgtttgtgtggtgattttgggcgtttatcgcgtggccgat
aatgcgatatcgatgggcggaattattgcagccgttatgttatcaagccgtgccatttca
cctatggcgcagcttgcaggcctgatgaccagagcaaaccacactgccagcgcactgcgt
cagcttaatgaaatcatgactcaagaagatgagtttgaaaataaagggcatttggttagt
aaacaaaggctgataggtaaaatcaatgctgatcatgtcggttttggttaccctggttca
gaaaaaccagtacttcatcctatgtcactgacgattaatcccggcgagcgtattgcgatt
attggccgcaatggttcaggtaaaagtacccttgccaagctattggttggactatttcaa
cctacagcaggaagcttgcgctatgacggtttagactcggcacaaatccatccgagtgat
ttacgccgtaactttggttatttgccccaagatgtcaccctgttccacggttcgattcgc
gacaatattttatttggtacacgccaagtcactgaacatcagctgatccgtgcagtacaa
ctttctggagtgagtcaatttaccaacctagaagcagaggggttagaccaacaggtcggc
gaaggcggcatgtcgctcagtcgcggacaaagacagaccgttgcccttgctcgtgccaca
ctcaatgaccctccagtgctattgatggatgagcccaccgccagcttggatgcgcgcgca
gaacaacaatttattcgctcaatgcagaatgttagcaaagacagaaccttgattcttatt
acccataagatgcatctgttgcagcttgtcgatcgcattatcgtactcgaacgcggtcat
gtggtcgcagatggtcccaaggcagaagtgttagaaaaactcaattttggcctcgtgaat
ggagaagctaaaagatga
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