Shewanella baltica OS185: Shew185_4053
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Entry
Shew185_4053 CDS
T00571
Name
(GenBank) Ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm00330
Arginine and proline metabolism
sbm00480
Glutathione metabolism
sbm01100
Metabolic pathways
sbm01110
Biosynthesis of secondary metabolites
sbm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Shew185_4053
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Shew185_4053
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Shew185_4053
Enzymes [BR:
sbm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
Shew185_4053
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
ABS10171
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Position
4833101..4835263
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AA seq
720 aa
AA seq
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MKSLKVAASLSVRSCFDIDREVVNVLTTDFCDVGAAVVSVEDVRNGIVEKIKNTGLKLPI
FVSVCCEETFPDDVCSSITGVFELCGDNTDFYGKQVETAVDKYEQALLPPFFGTLKKYVE
MGNSTFACPGHQGGQFFRKHPVGRQFFDFFGETIFRADMCNADVKLGDLLIHEGAPLAAQ
KYAAKVFNADKTYFVLNGTSSSNKVATNALLAKGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDAHCFQESYLRDQIREVAPERADEKRPFRLAIIQLGTYDGTIYNA
RQVIDKIGHLCDYVLFDSAWVGYEQFIPMMNDCSPLLLELTAEDPGIIVTQSVHKQQAGF
SQTSQIHKKDKHIKGQDRYCNHKRFNNAFMMHASTSPFYPLFAALDVNAKMHEGASGRYL
WREAVKAGIEARKLLLKKCKYIKPFVPTMIDGRLWQDYETEQMADDLRFFEFEPGQKWHS
FEGYDKGQYFVDPCKFLLTTPGIDVETGKYTDFGIPATILANFLRENNIIPEKCDLNSIL
FLMTPAEDMAKMQHLVSQISRFEKLVDEDAPLSEVLPNVYNANKARYQDYTIRQLCQEMH
NLYVSHDVKQLQKEMFRKAYFPTKVMDPQEANLEFIRGKVELVPLSKIEGRIAAEGALPY
PPGVLCMVPGEIWGGSVQRYFQALEEGINLLPGFSPELQGVYLENTPDGKIQAMGYVLNK
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcattaaaagtagccgctagcttatctgttagatcttgtttcgatatcgacaga
gaagtcgtcaatgtattaaccacagatttttgcgatgtgggcgcggctgtagtctctgtt
gaggatgttagaaatggtattgttgaaaagattaaaaacaccggattaaaactacccatt
ttcgtttcagtttgctgcgaagaaactttcccagacgatgtttgctcatctattactggg
gtatttgaactctgcggcgataacactgacttctacggaaaacaggttgaaactgcggtc
gataaatatgagcaagcgctattacctcctttcttcggcacactgaaaaagtacgttgag
atgggtaattccacctttgcttgtccaggtcaccaaggcggacaattcttccgtaagcat
cctgtgggtcgtcagttcttcgacttttttggcgaaacgattttccgcgccgacatgtgt
aatgccgacgtcaaattgggtgatttattgatccatgaaggcgcaccactggcagcgcag
aaatatgctgccaaagtctttaatgccgataaaacctactttgtacttaacgggacttca
tcttcaaataaagtggcgaccaatgcgctgcttgctaaaggtgacctagtattattcgac
cgcaataaccacaaatcaaaccaccatggcgcgttaatccaagctggtgcaacacccgtt
tatttagaaaccgcacgtaatcccttcggatttattggtggcatcgacgctcattgcttc
caagagtcctatttaagagatcaaattcgcgaagtcgccccagaaagagccgatgaaaaa
cgccccttccgtttagcgataatccagctcggcacctatgacggcaccatctacaatgct
cgccaagtgattgataaaattggtcatctgtgtgattacgtcttgtttgactcagcttgg
gtcggttacgaacagttcatccctatgatgaatgactgctcgccactcttgctcgaactg
accgctgaagatcctggcattatcgtgactcagtcggtgcataaacagcaggcgggcttc
tcgcaaacatcgcaaatccataaaaaagataaacatatcaaaggacaagatagatattgc
aaccataaacgcttcaacaacgcctttatgatgcatgcctctaccagccccttttatcca
ttatttgcggcgctagatgtgaacgcgaaaatgcatgaaggcgcaagcggtcgttacctg
tggcgcgaagcggtaaaagccggcatcgaagcacgtaagctactgctgaaaaagtgtaaa
tatatcaagccattcgtgccaaccatgatagatggccgcctatggcaagactatgaaact
gagcaaatggccgatgacttacgtttcttcgaattcgaacctggtcagaaatggcactcc
ttcgaaggttatgacaaaggccaatacttcgttgacccttgtaagttcctattaacaaca
ccaggcatagatgtagaaaccggtaaatataccgactttggtattccagcgactattctg
gctaacttcttacgggaaaataatattattcctgagaagtgcgacttaaattcgatttta
ttcctgatgacgcctgcggaagatatggccaagatgcaacatctggtctcgcaaatatct
cgattcgagaaattagtcgatgaagatgcgccattatctgaagttttacctaacgtctat
aacgcgaataaagcgcgttatcaagactataccatccgccaactctgccaagaaatgcac
aatctttatgtcagccatgacgtaaaacaactgcagaaagaaatgttccgtaaagcgtat
ttcccaaccaaagtcatggatccacaggaagcaaacctagaatttattcgtggcaaagtc
gaattagtcccactatcaaaaattgagggaagaatcgccgcagaaggcgcacttccttac
ccaccaggtgtgctatgtatggtaccaggtgaaatatggggtggctctgttcaacgttat
ttccaagctctcgaagaaggtatcaacttattacctggattctcgccagaactacaaggt
gtttatctcgaaaacactcctgacggcaaaattcaagcaatgggctatgtactaaataaa
taa
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