Shewanella baltica OS185: Shew185_4161
Help
Entry
Shew185_4161 CDS
T00571
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
sbm
Shewanella baltica OS185
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbm03021
]
Shew185_4161
Transcription machinery [BR:
sbm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Shew185_4161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Fe_dep_repress
UCR_14kD
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
ABS10277
LinkDB
All DBs
Position
complement(4963005..4963862)
Genome browser
AA seq
285 aa
AA seq
DB search
MTFQTQSMALTVPQGASSLEAYIHSVTSISMLDAEAEYELAKRLQETGDLQAAKQLIMSH
LRFVVHVAKGYSGYGLPQADLIQEGNIGLMKAVKRFDPDVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNIRKAKKRLGWFSDAEVTMVAENLGVSKADVTEMESRMAA
QDPAFDLTNDQDEEHDFAPVHYLEDHSSDLAENIENDNWESNAQGRLLSAIKTLDERSQH
ILRARWLDDDKTTLQELAETYQVSAERIRQLEKNAMNKLKACMEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacctttcaaacgcaatcaatggcactgacagtcccacagggcgccagtagtctagaa
gcttatatccattcagtgactagcatcagcatgctggacgctgaggctgagtatgagttg
gccaagcgtttacaggaaacgggtgatctacaagctgcgaagcaactgattatgtcgcac
ttacgttttgtagtgcacgttgcaaagggctattcaggctatggtttgccacaggcagac
ctgatccaagaaggcaacataggcttgatgaaagcggttaaacgcttcgatcccgatgtt
ggcgtgcgtctagtgtcttttgctgtgcactggatcaaagctgaaattcatgaatatgtg
ctgaaaaactggcgcattgttaaagtcgcgaccactaaagcgcaacgtaagttgttcttt
aacatccgtaaagcgaaaaaacgcttaggttggttcagcgatgcagaagtcactatggtg
gctgaaaatttaggtgtgtctaaggccgatgtgaccgaaatggaatcacgtatggctgcg
caagatccggcatttgatttaaccaatgatcaagacgaggagcatgattttgccccagtc
cattatttggaagatcattcatcggatttagcagaaaacattgaaaacgacaactgggaa
tcgaatgcccaaggtcgtttattatcggccatcaaaaccttagacgaacgcagccagcat
attctgcgcgcccgttggttagatgacgataaaaccacactgcaagaacttgcagagact
tatcaagtgtcggctgaacgtattcgccaacttgagaaaaatgccatgaacaagctgaaa
gcttgcatggaagcctaa
DBGET
integrated database retrieval system
