Shewanella baltica OS185: Shew185_4202
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Entry
Shew185_4202 CDS
T00571
Name
(GenBank) RNA binding S1 domain protein
KO
K06959
protein Tex
Organism
sbm
Shewanella baltica OS185
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
Shew185_4202
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
T2SSK
HHH_6
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ABS10318
LinkDB
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Position
complement(5006643..5009006)
Genome browser
AA seq
787 aa
AA seq
DB search
MQTNAHNIAQIIAQELNVREQQVAATITLLDDGATVPFVARYRKEATGGLDDTQLRTLYT
RLGYLRELNDRRQVILSSIQAQGKLTPELQRAIDDADSKTRLEDLYLPFKPKRRTKGQIA
IEAGLEPLADALLADRSADVEAKAAGYINSDAGFVDVKAVLEGARYILMERYAEDAELLR
KVREHLSQNSVLESRLIAGKEKEGAKFRDYFEHTEQLAKIPSHRALAMLRGRNEGFLALS
MNADPAAEAGQGSYCEVIISDHLGLKLGDSSVDQWLKTVVTATWRIKIALQMETEFISQM
RERAEAEAIKVFARNLGDLLMAAPAGAKATMGLDPGLRTGVKVAVVDNTGKMLCHATIFP
HAPQNLWEKSIRTLANLVKMHKVELIAIGNGTASRETDKLAAELIAAVKDTHPELTKVMV
SEAGASVYSASELATLEFPDLDVSIRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVS
QSQLSGSLEAVVEDCVNGVGVDLNMASAPLLSQVAGLNKTLAKNVVDYRDANGQFKNRKE
LLKVPRLGPKAYEQAAGFLRIREGDNPLDASSVHPEAYSLVETIAKTKQVELASLMGNSD
LLRSIKPEEFITTEFGLPTVTDILAELDKPGRDPRGEFKTAKFKDGVEELKHLKPEMVLE
GVVTNVTNFGAFVDIGVHQDGLVHISSLTDKFISDPHTIVKAGDVVKVKVMEVDVERRRI
GLSMRLDEAIDQSKSQQRPHNPARTHNGKAPQSTKPAARPAQKQAPKAPANAAMGNAFAD
AFAKLKK
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactaatgcacataacatcgctcagattatcgctcaagaactgaatgttcgtgag
caacaagttgccgcaaccatcactctgcttgacgatggtgcgacagttcccttcgttgcc
cgttatcgtaaagaagccacgggcggattagacgatacgcaactgcgtaccttgtataca
cgtttaggttacctgcgtgagctgaacgacagacgccaagtgattctgtctagcatccaa
gctcagggtaagttaacgccagaattacaaagggctattgacgacgcagacagcaagaca
cgtctcgaagatttgtatctgcccttcaaacctaagcgccgcactaagggccaaatcgct
atcgaagctgggcttgaaccgttagccgatgccttactggctgaccgtagcgccgatgtt
gaagccaaagcggcgggttatatcaatagcgacgcgggttttgtcgatgtgaaagctgtg
cttgaaggcgcgcgttatattctgatggagcgctacgccgaagacgcggaattactgcgt
aaagtgcgtgaacatttaagccaaaacagtgtgttagaaagccgcttaattgcaggtaaa
gagaaagaaggcgcgaaattccgtgattatttcgagcataccgaacagttagctaagatc
ccttctcaccgtgcgctggcgatgctgcgtggtcgtaacgaaggtttcttagcgttatct
atgaatgccgatcctgctgctgaggccggtcaaggtagttattgcgaagtgattatcagt
gatcacttagggctgaaactgggcgatagcagcgtcgatcaatggttgaaaactgtagtg
acggcgacatggcgcattaagattgcgctacagatggaaaccgagtttatttcgcaaatg
cgcgaacgcgccgaagccgaggccattaaagttttcgcccgtaacttaggtgatttattg
atggccgctccagcgggcgcgaaagcgaccatgggactcgatccaggtttacgtactggc
gtgaaagtggcggtggtcgataacacgggtaagatgttgtgccatgcgacgattttcccg
catgcaccgcaaaatctgtgggaaaagtcgattcgtactctggcgaacttagtcaaaatg
cataaggttgaattgattgcgattggtaacggcacggcatcacgggaaaccgacaagctg
gccgctgagctgattgccgccgtgaaagatacccatccagagttgactaaagtgatggtc
agcgaagcgggcgcgtctgtgtattcggcatcggaattggcgacgctagagtttcctgat
ctcgatgtctcgattcgtggtgctgtgtctatcgcgcgtcgtttgcaagatccgttagcc
gaactggtgaagattgagcctaagtctatcggtgtgggccaataccaacacgacgtgagc
caaagccaattatcgggttcgctggaagccgtggtggaagactgtgtaaacggcgtgggt
gtggatctcaacatggcctcagcacctttgttgtcgcaagtagccggtttaaacaagaca
ttagcgaaaaatgtggtcgattatcgcgatgccaatggtcagtttaagaatcgtaaagag
ctgctgaaagtgccacgtttagggcctaaagcctatgagcaagcggcgggctttttgcgt
attcgtgaaggtgacaacccactcgatgcatcttctgtgcatccagaggcttattcgtta
gtggaaactatcgctaagactaagcaagtggaactggcgagcctgatgggtaactcagat
ctactgcgcagcatcaaacctgaagagttcattacgacggagtttggtttaccaactgtg
acggatattttagccgagctggataagccgggacgcgatccccgtggtgagttcaaaacc
gccaagtttaaagatggtgtggaagaacttaagcacttaaaacctgaaatggtgctcgaa
ggcgtagtgaccaacgtgactaactttggtgccttcgtcgatattggcgtgcatcaagat
ggactggtgcatatctcctcactgaccgacaagtttattagcgatccccacacaatcgtg
aaagcgggtgatgtggtgaaagttaaagtgatggaagtagatgttgagcgtcgccgtatc
ggtttgagcatgcgtttggatgaagctatcgatcaaagtaaatcgcagcaaagaccacat
aatcctgccagaactcataatggtaaggcaccacagtcgacgaaacctgctgcacgtcct
gcgcaaaagcaagcacctaaagcacctgcgaacgcggccatgggcaatgcctttgccgat
gccttcgctaagctgaaaaagtaa
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