Shewanella baltica OS195: Sbal195_0252
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Entry
Sbal195_0252 CDS
T00622
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
sbn
Shewanella baltica OS195
Brite
KEGG Orthology (KO) [BR:
sbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbn03000
]
Sbal195_0252
Transcription factors [BR:
sbn03000
]
Prokaryotic type
Helix-turn-helix
Other families
Sbal195_0252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_30
AAA_5
AAA_2
PAS_4
Mg_chelatase
AAA_3
PAS
nSTAND6
PAS_9
PAS_8
AAA_7
HTH_22
Diguanyl_cycl_sensor
HTH_28
HTH_1
HTH_23
RsmI_C
HTH_29
HTH_50
Motif
Other DBs
NCBI-ProteinID:
ABX47434
UniProt:
A9KX38
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Position
290025..291983
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AA seq
652 aa
AA seq
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MAVKPHLPSTQAWLADSWQRSIGAGLSEFQLPQELRLDASELKQKHEQYQMLIALVQSHA
LPLFNQLMAHSNSRLLLSDAEGYVLRHWGVSRYSTKLADVALDIGVNWLEQHKGTNAIGT
ALTAKQAVSVVGEQHFIRQNRFMSCTACPIFSPQGEMLGVIDITSEQQRHTQQTLMLVSS
LAQQVETALLCHLPDSHYRIDLAAQPNLLNSGWQGIVIADSDGRIVGCNPMAKQLLNQAK
VGDSVEQYLGDNWSRAGGFNQHLDLHLQTQPLNIPSAKGRVAMSNKSLTQLGVRFRDPQL
ERAWQHANKVITKQIPLLVLGETGVGKEQFVKKLHAQSARRTEHLVAVNCAALPAELVES
ELFGYQAGAFTGANRTGFIGKIRQAHGGFLFLDEIGEMPLAAQSRLLRVLQEREVVPVGS
NQSFKVDIQIIAATHMDLEQQVAQGLFRQDLFYRLNGLQVRLPALRERQDIERIIHKLHR
KHRIAPQAICPELLGQLMLHDWPGNLRELDNLMQVACLMAEGDDTLTWQHLPDYLAQKLA
CDLLKVDPLNAQLLNTLQLNEEQPLGEEVKIGQNSASHPLAGKVVSGKVTSGNTATLPTA
TAVQSDSLHEAIYSNVLQAYKASDGNVSQCAKRLGISRNALYRRLKQMGLKG
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcagttaaaccgcatttaccatcgacacaggcgtggttggccgattcgtggcagcgc
agcattggcgctggcttgtctgaatttcagttaccccaagagcttaggctcgacgccagc
gaactaaagcagaaacatgagcaatatcaaatgctcattgcattagtgcaatcccatgct
ttgcccttgttcaatcagttgatggcgcattctaatagccgactcttgctctccgatgcc
gagggttatgtgcttaggcactggggcgtgagccgctactccacaaaactggcggacgtg
gctttggatatcggggtgaattggctcgaacagcacaaaggcaccaatgcgatagggacg
gcactcaccgccaagcaagccgtatctgtagtgggtgagcagcattttattcgtcagaat
cgttttatgagttgcaccgcctgcccgatattttccccccaaggtgagatgctcggggtg
atagatatcaccagcgagcagcaaagacacacccagcagacgctgatgttagtgtcgagt
ttggcgcagcaggtcgagaccgcacttttgtgtcatctgcccgatagccattatcgaatc
gatttagcggcgcagccaaatttactgaattcgggttggcagggcatagtgattgccgac
agcgatggccgcattgtgggttgtaatcccatggcgaaacaattgcttaatcaagccaag
gtgggtgatagcgttgagcagtacttaggcgataattggagccgtgcgggtggttttaat
cagcatttagacttgcatctacagactcagcccttaaacattcccagcgctaaggggcga
gttgcgatgagcaataaatcgctcactcaactgggcgtgcggtttcgcgatcctcaactt
gagcgcgcatggcaacatgccaataaggtgatcaccaagcaaattccgctgttagtgctt
ggtgaaaccggcgtcggtaaagagcagtttgttaaaaaactccacgcccagagcgcgcgt
cgcaccgagcatttagtggcggtgaactgcgcggcattgcctgcagagttagtcgaatct
gaactctttggttatcaggcgggcgcgtttactggggcgaaccgcactggatttatcggc
aaaattcgccaagcccacggcggttttttgtttttagatgaaataggtgaaatgccgctg
gcggcacagagtcgtttactcagggtattgcaggagcgcgaagtggtgcccgttggcagt
aatcaaagttttaaagttgatattcaaatcattgccgcgacccatatggatttggagcaa
caagtggcgcaggggctgtttcgacaggatttattctatcgattaaatggtctacaagtg
cgtttgcctgcgctgcgggagcggcaggatatcgagcgcattatccataaattgcatcgt
aaacatcgcattgcgccgcaggcgatctgcccagagttgttagggcaattaatgctacac
gactggcccggcaatttgcgtgagctggataatcttatgcaagtcgcgtgtttaatggct
gaaggtgatgacaccttaacttggcagcatttacccgattatcttgcacaaaaattagcg
tgcgatctgttaaaagtggatccgttaaatgcacagctgttaaacacactgcagttaaat
gaagagcagccattaggtgaagaggttaaaatcggtcaaaactctgcatcacatccgctg
gctggcaaagttgtgagtggcaaagttacgagtggcaacactgcgacgctgccaactgcc
actgcggttcaatcggattctctccacgaggcgatttatagcaatgtgctacaggcatac
aaagcctctgatggcaatgtgagccaatgcgccaagcgtttggggatcagccgtaatgcc
ttgtatcgtcgattaaaacagatgggacttaagggttaa
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