Shewanella baltica OS195: Sbal195_0672
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Entry
Sbal195_0672 CDS
T00622
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sbn
Shewanella baltica OS195
Pathway
sbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sbal195_0672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbn03019
]
Sbal195_0672
03110 Chaperones and folding catalysts [BR:
sbn03110
]
Sbal195_0672
03029 Mitochondrial biogenesis [BR:
sbn03029
]
Sbal195_0672
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbn04147
]
Sbal195_0672
Enzymes [BR:
sbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Sbal195_0672
Messenger RNA biogenesis [BR:
sbn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Sbal195_0672
Chaperones and folding catalysts [BR:
sbn03110
]
Heat shock proteins
HSP60 / Chaperonin
Sbal195_0672
Mitochondrial biogenesis [BR:
sbn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Sbal195_0672
Exosome [BR:
sbn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Sbal195_0672
Exosomal proteins of other body fluids (saliva and urine)
Sbal195_0672
Exosomal proteins of breast cancer cells
Sbal195_0672
Exosomal proteins of colorectal cancer cells
Sbal195_0672
Exosomal proteins of bladder cancer cells
Sbal195_0672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABX47850
UniProt:
A9L0C1
LinkDB
All DBs
Position
818934..820571
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKEVVFGNDARVRMLAGVNILANAVKVTLGPKGRNVVLDKSFGSPLITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVVEGLKAVAAGMNPMDLKRGI
DKAVIAAVAELKALSQPCADSKAIAQVATISANSDESIGEIIATAMEKVGKEGVITVEEG
QALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGL
AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTV
IAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQTQIAARVSQIKQQVEESTSDY
DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RVASKIAEVEVLNEDQKHGVVIALRAMEAPLRQIATNAGEEASVVANTVKNGSGNFGYNA
GNDTYGDMLEMGILDPTKVTRCALQFAASIAGLMITTEAMVAEIPQNSAPDMGGMGGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagttgtatttggtaatgacgctcgcgtaagaatgctggctggcgta
aacattctcgcaaacgcagtgaaagtgaccttaggccctaaaggccgtaacgtggtatta
gacaagagcttcggctcaccactgatcactaaagacggtgtgtctgttgccaaagaaatc
gagttagaagacaaattcgaaaacatgggcgcgcaaatggtgaaagaagttgcttctaaa
gccaacgacgccgccggtgatggtactactactgcaactgtactggctcaagccattgtt
gttgaaggcttaaaagccgttgcagccggtatgaaccctatggatctgaagcgcggtatc
gacaaagccgttatcgctgcagttgctgaattaaaagccttatcacaaccttgtgccgac
tcaaaagcgattgcgcaagttgcgactatttctgcaaactctgacgaatctatcggcgaa
atcatcgcaactgcgatggaaaaagtcggtaaagaaggcgtgatcacagttgaagaaggc
caagcgttagaaaacgaattggacgtagtagaaggtatgcagtttgatcgtggctacctg
tctccatacttcatcaacaagccagaaaccggcagcgttgagttagaccacccattcgta
ctgttagtagacaagaaaatctctaacattcgcgaactgttacctatccttgaaggtctg
gcaaaaaccggtaagccattgcttatcgttgctgaagacgttgaaggcgaagcattagca
acgctagttgtgaacaatatgcgcggtatcgtgaaagtggctgccgttaaagcacctggc
tttggcgatcgtcgtaaggcaatgctgcaagacgtagcaatcctgactggcggtactgtt
attgctgaagaaatcggcctagagcttgaaaaagcaaccctggaagatttaggtacagct
aagcgtgttgtgatcactaaagacaacaccaccatcatcgatggtaacggcgagcaaaca
caaattgctgctcgtgtaagccaaatcaaacaacaagttgaagaatcaacttctgactac
gacaaagaaaaactgcaagagcgtatggctaaactagctggcggcgtagcagtgattaaa
gttggcgcagcgactgaagttgaaatgaaagagaaaaaagcccgcgttgaagatgctctg
catgcaactcgcgctgcggtagaagaaggcgtggttcctggcggcggtgttgctctggtt
cgcgtagcttctaagatcgctgaagtagaagtattaaacgaagaccaaaaacacggtgtg
gttatcgcactgcgtgcaatggaagcgccactgcgtcaaatcgccactaacgcgggtgaa
gaagcgtcagttgttgctaatacagtgaagaacggcagcggtaactttggttataacgcc
ggtaacgatacttacggtgacatgttagaaatgggtatccttgacccaactaaagtgacc
cgttgtgcattgcaattcgctgcgtcaatcgcaggtctgatgatcactacagaagctatg
gttgctgaaattccacaaaactctgcgccagatatgggcgggatgggtgggatgggcgga
atgggcggcatgatgtaa
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