Shewanella baltica OS195: Sbal195_0882
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Entry
Sbal195_0882 CDS
T00622
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sbn
Shewanella baltica OS195
Pathway
sbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sbal195_0882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbn03019
]
Sbal195_0882
Enzymes [BR:
sbn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Sbal195_0882
Messenger RNA biogenesis [BR:
sbn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Sbal195_0882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
ABX48059
UniProt:
A9L2H7
LinkDB
All DBs
Position
complement(1043035..1044576)
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AA seq
513 aa
AA seq
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MVYDSRQIFNQITDHISRCPIFRRISQFCKQLFEDAPKTTAPTPAQIEPTTPEQSSGALS
LELVPRDAHTISRKQISENALKVLYRLNKSGFKAYLVGGGVRDLLLGIEPKDFDVVTNAT
PEEIKKLFRNCRVVGRRFRLAHIVFGRDVIEVATFRGHHGESNEKVSKANAEGRLLRDNV
YGEIDEDAERRDFTVNALYYDISDYSIRSYGGGMADLKAGTLRLIGDPETRYREDPVRML
RAVRFATKLNMGIETVTAAPIKQLAPLLKDIPAARMYEEVLKLFFAGKALANFELMQEYK
LFAPLFPQVAALLKDDPKGTTMKMVQAIMKSTDQRVNEDKPVTPSFFYAALLWYPLRQRA
EDIAVESGLTLYDAFFAAMGDVMEQQCQTISIPRRFSTPAKDIWQLQLRFDRSQGTRAFK
LMEHPKFRAAYDLLLLRGEVEAGNVAKSAAWWQQFVEADETERLAIARSGSKSPNRNRNA
TQRRRRPRAPNADGSAATSAPKTSGTPKAKAAE
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
ttggtatatgatagccgccagatttttaatcaaataacagatcatatttcgaggtgtccc
atttttcgccgtatcagccaattctgcaaacagctatttgaagacgcgcctaaaacgacc
gctccgactccagctcagattgaaccaacaacgcctgaacaaagttctggagcgttaagc
ttagagttagtgccaagagatgcccataccatctcgcgcaaacaaatcagcgaaaatgcc
cttaaggtgttatacagactgaataaatcaggttttaaagcctatttagtcggcggcggt
gtacgcgatttactcttagggattgaaccgaaagatttcgacgtagtgaccaatgcgaca
ccggaagaaatcaaaaaactgttccgcaactgccgagtcgttggccgtcgtttccgtctg
gcccatattgttttcggccgcgatgttatcgaagtggcgacctttcgtggtcaccatggc
gaaagcaatgagaaagtctctaaagccaatgccgaagggcgtttgctacgtgataacgtt
tatggcgaaatcgacgaagatgccgagcgccgcgattttaccgtcaatgccctctattac
gatatcagcgattactcgatccgcagctatggcggcggtatggccgatctcaaagcgggt
acgttgagattaattggcgatcctgaaacccgttaccgtgaagatccggtgcgtatgtta
agggcggtgcgtttcgccactaaactcaacatgggtatcgaaacagtaacagctgcgccg
attaaacaattagcgccactgctaaaagatattcccgcagcgcgtatgtacgaagaagtg
ctgaaactcttctttgcaggcaaagccttagccaacttcgaactgatgcaagaatacaag
ctattcgcgccgctgtttccgcaagtggccgctctgctaaaagatgatcctaaaggcacg
accatgaaaatggtgcaagccattatgaagagcacagatcaaagagttaacgaagataag
ccggtgacgccttcattcttctatgctgcgcttctctggtatccactgcgtcaacgcgcc
gaagatattgccgttgaaagtggcctgacgttatatgatgccttctttgctgctatgggc
gatgtgatggagcagcaatgccaaaccattagcattccacgccgttttagtacgccagca
aaagacatttggcagttacagttacgctttgaccgtagccaaggcactcgtgcttttaaa
ctaatggaacaccctaagtttagagccgcatacgatttgctattgctcaggggcgaagtc
gaggcgggtaatgtcgctaagagtgccgcttggtggcaacagtttgttgaagccgatgaa
actgaacgcttagccattgcgcgtagcggcagtaaatcgcccaatcgtaaccgtaatgcc
actcaacgtcgtcgccgtcctcgcgcaccgaatgcagatggttcagccgcgacgagcgca
cctaaaacaagtggcacgccaaaagcgaaagcggctgaataa
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