Shewanella baltica OS195: Sbal195_1362
Help
Entry
Sbal195_1362 CDS
T00622
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
sbn
Shewanella baltica OS195
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
5TM-5TMR_LYT
PAS_9
PAS
PAS_8
PAS_4
PAS_11
Motif
Other DBs
NCBI-ProteinID:
ABX48537
UniProt:
A9KTJ6
LinkDB
All DBs
Position
1627088..1630135
Genome browser
AA seq
1015 aa
AA seq
DB search
MDKGILFPLVQNAALLLALVFLYDVIPKKHQRQYFLLWRIIIGMLIGGIGITIMSTPWIY
QPGVFFDTRSVILCISGLFFGGLPTFIAVVMTALYRISIGGAGMWIGVGVIVSSGLIGVI
WRQYRKSYLANISGGEIFLFAYAVHIVMLLWFVFLPNGIGMPLLEQVTLPVLTIFPIATW
LLSRLLSRRFELERDEQIRLQDDFLFRSQFNAGNIGIAITGIDQKWIKVNPRLCQMLKYS
EAELLRMTWAQITHPDDLETDALKFELMLQGDIDNYEMDKRFIVKDGSVVYTHMTVACKR
GGNNAVLLVIAGYLDITAQAFADQEVLASREQLELVLSSSDLGVWDWDIRHDRIERNARS
ADILGCDVDMLNANSRQWMDAIVAEDRPKVLHSIEAHIRGETAQHKMEYRLNTLNRKVRW
ILDTGKVVSRDANDNALRMCGTYTDITDAKLIEESLKLSALVYDNSSEAMSVLDEKGVII
TVNAAFSVMTGYREFEVRDQHIRLLYCDLNGRDFYIKMNNEIREKGQWQGEMWQRRKNGE
EYVIWLTINTINDKEGHPYRRVALFSDITDKKQNEHLIWKQANYDTLTGLPNRRMLLEYL
SSEVKNADRNRNHFALLFLDLDFFKEVNDTLGHAMGDLLLIETASRLKSCVRDADVVARL
GGDEFTVVLSSMEDHKGIERVAENILRRIAEPYVLGEETAYISASIGITLYPDDSTSIEG
LLKHADQAMYAAKDQGRNRFNYFTPSMQEYAKYRMRLIQDLRQAVANKEFELHYQPIVAL
ATGEVTKAEALIRWHHAERGAVSPAEFIPVAEDTGLIVEIGNWVFEQAARQSAAWRHELG
VEIQISVNKSPIQFRDEGTLLNDWLKLLQDLNITGAGVCVEITEGLLLDASMGVTEKLLA
YRDAGVQVSLDDFGTGYSSLAYLKKFDIDYLKIDQSFTRHIDTDSNDQILCEAIIVMAHK
LGMKVIAEGVETEAQRQVLLAAGCDYGQGYLFSRPVPAAEFTQKYLQDPPLVSRV
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggataaaggtattctctttccgttagtgcaaaatgcggctttgctgctggcgttggta
tttttgtacgacgtgatccctaaaaagcatcagcggcagtatttcttactgtggcgtatc
attattgggatgctcatcggtggtattggtatcacaatcatgagcacgccttggatatat
caaccgggcgtttttttcgatactcgctcggttatcctctgtatttcaggcctctttttc
ggtggtttgccaacctttattgctgtcgtgatgacggcgctatatcgcatcagtattggt
ggcgctgggatgtggattggcgtcggcgtgatagtgtcatccgggttaattggggtgatc
tggcgtcaatatcgtaaatcctatttagcgaacatttcaggtggagaaatctttctcttt
gcctatgccgtccatatcgtaatgctgctgtggtttgtatttttacccaatggcatagga
atgcccttgcttgaacaagtcaccctacctgtgctcaccattttccccattgcgacttgg
ctactgagccgcctgttgtcacggcgttttgagttagaacgtgatgaacaaattcgtcta
caggacgattttctatttcgcagtcaattcaacgcgggcaacattggtattgcgataacg
gggattgaccaaaagtggataaaggtgaatccacgtttatgccaaatgctcaaatattca
gaggctgaattgctgcggatgacgtgggcgcaaatcacccatcccgatgatttagaaacc
gatgcgctgaaatttgagcttatgttacaaggcgatatcgataattacgagatggataag
cgttttatcgttaaagacggcagcgtggtttacacccatatgacagtcgcctgcaaacgg
gggggcaataacgccgtgttgcttgttattgctggatatttagatattactgcccaagcc
tttgccgaccaagaggtacttgctagtcgtgagcaactcgaactggtgctgagcagtagc
gatcttggggtatgggattgggatattcgtcatgatcgtatcgaacgtaacgcccgcagc
gccgatattctcggctgcgatgtggatatgctcaacgccaacagtcgccaatggatggac
gcgattgtcgccgaagataggcctaaagtgttgcactcgattgaggcccatattcgcggc
gaaacggcgcaacataagatggaatatcgcctaaatacactcaatcgcaaagtgcgctgg
attttagacacaggtaaagtggtgagccgtgacgccaacgataatgccctacggatgtgc
ggaacctataccgatattaccgatgcaaaacttatcgaagaatcattgaaattgtcggcg
ctggtatacgacaacagctcagaagccatgagtgtactcgatgaaaagggcgtgatcatt
accgttaatgccgcctttagtgtgatgaccggctatcgtgaatttgaagtacgggatcaa
catattcggctgctttattgcgacctcaatggccgtgatttttacatcaaaatgaacaat
gagatccgtgaaaagggccaatggcaaggggaaatgtggcagcggcgtaaaaatggtgag
gaatatgtcatctggttaaccatcaataccatcaatgacaaagaaggccatccctatcgg
cgggtggcgctgttttctgacattaccgacaagaagcaaaatgagcatcttatctggaag
caagccaactacgatacgctgacgggcttgcccaatcggcgcatgttattggagtattta
agcagcgaagtgaaaaacgctgaccgcaatcgcaaccactttgccttattgttcttggac
ttagatttctttaaagaagtgaatgacaccttaggccatgccatgggcgatttactgttg
atagaaactgcgagccgcttgaaatcctgcgtgcgtgatgccgacgtcgtggcccgtctt
ggcggcgatgaatttactgtagtgttaagttcgatggaagatcataagggcattgagcgc
gttgccgagaatattctgcggcgaattgccgagccctatgtgctgggtgaagaaacggct
tacatcagcgccagtattggaataactttgtatcccgatgattcgaccagtattgaaggc
ttacttaagcatgcggatcaggctatgtatgcggcgaaagatcaaggccgcaatcgtttc
aactatttcaccccatcgatgcaggaatacgccaaataccgcatgcgcttgatccaagat
ttgcgtcaagcggtcgccaataaagaatttgaactgcattatcagccgattgttgcttta
gcgacgggggaagtgactaaggccgaagccttaatccgctggcaccatgccgagcgtggc
gctgtgtcacccgccgagtttattccggtggcggaagacacgggtttgatagttgaaatc
ggtaattgggtgtttgagcaagccgcgcgtcaaagtgcggcgtggcgccacgagttaggg
gttgaaatccaaatcagcgttaacaaatccccaatccaatttcgcgatgaaggcacgctg
ctcaatgattggttgaagttattgcaagatctcaatatcacgggcgcgggcgtgtgcgtt
gaaattaccgaaggcttgttattggacgccagtatgggtgtgaccgaaaaactactggcc
taccgcgatgcgggcgtgcaagtgtcgttggacgattttggtactggctactcgtcactc
gcctatctgaaaaagtttgatatcgattatcttaaaattgatcaatcttttacccgccat
attgataccgattcaaacgatcaaattctctgtgaggcgataatcgtgatggcccacaag
ttggggatgaaagtgattgccgaaggtgtcgaaaccgaggcgcagcgccaagtgttattg
gcggcaggttgtgactacggccaaggttacttgttctcaagacctgtgcctgccgctgaa
tttacccaaaaatacctgcaggatccgccgttagtctcccgtgtctga
DBGET
integrated database retrieval system
