Shewanella baltica OS195: Sbal195_1717
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Entry
Sbal195_1717 CDS
T00622
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
sbn
Shewanella baltica OS195
Pathway
sbn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Sbal195_1717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbn03400
]
Sbal195_1717
Enzymes [BR:
sbn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
Sbal195_1717
DNA repair and recombination proteins [BR:
sbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Sbal195_1717
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sbal195_1717
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sbal195_1717
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Hemotin
Motif
Other DBs
NCBI-ProteinID:
ABX48890
UniProt:
A9KXF1
LinkDB
All DBs
Position
complement(2065304..2066722)
Genome browser
AA seq
472 aa
AA seq
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MKMKDDKAGSIFWHDYETFGANPAKDRPSQFAGIRTDLDLNIIGEPETFYCKQAPDYLPS
PEAILITGITPQLANLKGVPETEFMGRIQALFSQPNTCVAGYNSLRFDDEVTRYGFYRNF
IDPYAREWQNGNSRWDIIDLVRACYAFRPEGINWPTKEDGSPSFKLEHLTQANGLSHEKA
HDAMSDVYATIAMAKLIREKQPKLYQYYFDLRRKQAVSDQIDVLNMQPLVHVSSKISARN
GCTTLISTVAHHPNNKNAVICVNLAMDLTPLFELDIEQIKTRMYTPRADLAEDELPIAVK
QIHLNKCPFITSAKILSDEHAARLGIDKEFAREQYKRLKLHPELREKLALLFEHDDSRAT
TDPDLMLYSGGFFSQADKAKMEIIRHTLPQNLAALDLQFDDPRIPEMLFRYRARNYPELL
DYEESQRWREFCQNRLADQDYVLKLENLLQDTQADETKQKLLAALCHYLREL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaaagacgataaagcagggtcgatattttggcacgactacgaaaccttcggg
gctaacccggcgaaagacagaccctcgcaatttgccggtattcgcacggatttagatctc
aatattatcggcgagcctgagacattttattgcaagcaagcccctgattatttgccgtca
ccagaagcgatattgatcacagggatcacgccgcagttagccaatttaaaaggagtccct
gaaactgagtttatggggcgtattcaagcactgtttagccagccaaacacctgtgtcgcg
ggctacaactcactgcgttttgatgatgaagtgacccgttacggcttttatagaaatttt
atcgatccctatgcccgtgaatggcaaaatggtaactctcgttgggatatcattgattta
gtgcgcgcgtgttacgcatttagacccgaagggatcaattggccaaccaaggaagatgga
tctcctagttttaagctagaacatttgacccaagcgaatggtttaagccatgagaaagcc
catgatgccatgtctgatgtgtatgcaaccatcgctatggcaaaactcattcgcgagaaa
caacctaagttatatcagtactattttgacctgcgccgtaagcaagcggtgagcgatcaa
atcgatgtgctcaatatgcagccgttagtacacgtgagttctaagatcagtgcgcgcaat
ggttgtacgacgttgatttccaccgtggcgcaccatccaaacaataaaaatgcggttatt
tgcgttaatttagccatggatttaacgccactctttgagctagatatcgagcaaattaaa
acgcgtatgtatacgccaagagccgatcttgccgaagacgaattaccgatcgcggtaaaa
caaattcatttaaataagtgcccttttatcacttcggctaaaatcctcagcgatgaacat
gccgctcgtttaggcatagataaagaatttgccagagagcaatataaacgccttaaactt
cacccagaactacgtgaaaaactggcgctattatttgagcacgatgacagcagagcgacc
actgatcccgatttgatgctgtattctggtggtttctttagccaagctgataaagcgaaa
atggaaatcatccgtcataccctaccgcaaaatttagcggcgctagacttgcagtttgat
gacccacgtatccctgaaatgctgtttcgttaccgtgcccgtaattaccctgaactactc
gattacgaagagtcacagcgctggcgtgaattctgtcaaaatcgcttagccgatcaagac
tacgtacttaaattagaaaatctgctgcaagatacacaagcggatgagactaaacagaag
ttactggctgccctctgtcattatttgcgtgaactttaa
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