Shewanella baltica OS195: Sbal195_1898
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Entry
Sbal195_1898 CDS
T00622
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbn
Shewanella baltica OS195
Pathway
sbn00061
Fatty acid biosynthesis
sbn00071
Fatty acid degradation
sbn01100
Metabolic pathways
sbn01212
Fatty acid metabolism
sbn02024
Quorum sensing
sbn04146
Peroxisome
Module
sbn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sbal195_1898
00071 Fatty acid degradation
Sbal195_1898
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sbal195_1898
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sbal195_1898
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbn01004
]
Sbal195_1898
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbn04147
]
Sbal195_1898
Enzymes [BR:
sbn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sbal195_1898
Lipid biosynthesis proteins [BR:
sbn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Sbal195_1898
Exosome [BR:
sbn04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sbal195_1898
Exosomal proteins of breast cancer cells
Sbal195_1898
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
Motif
Other DBs
NCBI-ProteinID:
ABX49069
UniProt:
A9KYY1
LinkDB
All DBs
Position
2266622..2268295
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AA seq
557 aa
AA seq
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MDQPWINHLPKDVPAEINVEQYSSLVDMFETAVAKYEDQPAFINMGATLTYRKLEERSRA
FAAYLQNELKLEKGDRVALMMPNLLQYPIALFGVLRAGMVVVNVNPLYTPRELKHQLIDS
GAKAIVVVSNFARTLEEVVEQTPVESVIITRLGDQLSAPKRTLVNFVVKYIKKLVPKYDL
PHALSMRDTLSTGRRMQYIKPDVTNDDLAFLQYTGGTTGVSKGAMLTHGNIVANVLQADG
AYSPALNDGSEFVVTALPLYHIFALTVNCLLFLHKGSQNLLITNPRDIPGFVAELKKYPF
TALTGVNTLFNALVNSDEFSQLDFSRLKLSIGGGMAVQKAVADKWQAITKTRLLEGYGLT
EASPLLTCCPYNLDGYNGSIGFPAPSTLIQIRDDDGKVLAQGETGELFGKGPQVMKGYWQ
RPEETAKVIDTDGWLATGDIGYMDEKGFFYIVDRKKDMILVSGFNVFPNEVEEVVALHPK
VIEVAAVGVPNDASGELVKVFVVAKDKSLTAEDIIKHCRIHLTGYKVPKLVEFRDELPKT
NVGKILRRELRDEAKRA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
gtggatcagccttggattaatcatttgccaaaagatgtgcctgctgaaattaatgtggag
cagtactcatcgcttgttgatatgttcgaaacagcggtggctaagtatgaagatcaacct
gcatttatcaacatgggtgccacgctaacctaccgtaaattggaagaacgcagccgtgca
ttcgccgcgtatctacaaaatgaattaaagcttgaaaagggcgatcgtgtcgccctgatg
atgccaaacctgctgcaatacccgattgcgctgtttggggtattacgtgccggtatggtg
gtcgttaacgttaacccgctatataccccgcgcgaactcaaacatcagttgattgactcg
ggcgccaaagccatcgttgtagtgtcaaacttcgcccgcaccttagaagaagtggtcgaa
caaacgcccgttgaaagcgtcatcattacccgtttgggtgatcaattaagcgcacccaaa
cgcaccttagtgaactttgtggtgaagtacattaagaagttagtgccaaaatatgattta
ccccacgcattatcaatgcgcgacaccttatcaaccggtcgtcgcatgcaatacattaaa
cctgacgtcactaacgatgacttagcgtttttacaatacacaggtggcaccactggggtg
tctaaaggcgcgatgttgacccatggcaatattgtcgccaacgtattgcaggccgatggc
gcttattcgcccgccttaaacgatggcagtgagtttgtggtaacggctttgccgctgtat
cacatcttcgcgttgaccgtgaattgcctgctgtttttgcacaaaggcagccagaactta
cttatcaccaatcctcgtgatatcccaggatttgttgccgagttgaaaaagtatcctttc
actgcattgactggggtaaacaccttgtttaacgcgttagtgaacagtgatgaattttcc
cagttggatttttcacgcttaaaactctctatcggtggtggcatggcggtacaaaaagcc
gtggcggataaatggcaagctatcactaagacccgtttactcgaaggttatggtctgacc
gaagcctcacctttattaacctgttgcccatataatttagatggttacaacggttcaatt
ggtttccctgcaccttcgacgctcattcaaatccgtgacgatgacggcaaggtattagcc
caaggcgaaaccggtgaactgttcggtaaaggtcctcaggtaatgaaaggctattggcaa
cgtcctgaagaaactgccaaagtgattgataccgacggctggttagccacgggcgatatt
ggttacatggatgagaaagggttcttctatattgtcgatcgtaagaaagacatgatctta
gtttcaggctttaacgtattccccaatgaagtcgaagaagtggtcgcactgcatcctaaa
gtgattgaagtggccgctgttggtgtaccaaacgacgccagtggtgagttagtgaaggta
tttgtggtggcaaaagataaatctttaaccgctgaagacatcattaagcactgccgtatt
catttaacgggatataaagtaccgaagctggtagaatttagggacgagttacctaaaacc
aacgtgggtaaaatcttgcgacgagagcttagagacgaagctaagcgcgcgtaa
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