Shewanella baltica OS195: Sbal195_2460
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Entry
Sbal195_2460 CDS
T00622
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sbn
Shewanella baltica OS195
Pathway
sbn03030
DNA replication
sbn03430
Mismatch repair
sbn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sbal195_2460
03430 Mismatch repair
Sbal195_2460
03440 Homologous recombination
Sbal195_2460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbn03032
]
Sbal195_2460
03400 DNA repair and recombination proteins [BR:
sbn03400
]
Sbal195_2460
Enzymes [BR:
sbn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sbal195_2460
DNA replication proteins [BR:
sbn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sbal195_2460
DNA repair and recombination proteins [BR:
sbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sbal195_2460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DUF3572
DNA_pol_A_exo1
Phage_TAC_11
HUTI_composite_bact
Motif
Other DBs
NCBI-ProteinID:
ABX49628
UniProt:
A9L3L8
LinkDB
All DBs
Position
2911108..2911734
Genome browser
AA seq
208 aa
AA seq
DB search
MPTSAANTLVVLDFETTGLSPNQGDRAIEIGAVLIEDGVITQRFSELMNPGFRISRFIED
YTGISNQMLRDAAPCNEVMARFADFIADHNLVAHNAAFDQRFLDAEFAQIRHRYLGQFGC
SLLVARRLYQAAPNHQLGTLVRYKQLPTDGTFHRALADAEMTGHLWLAMLADLQQEFGLC
SPTFELLQKLAKKTKAEVPKFLRQYAGK
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgcctacatcagctgctaacactttggtcgtgctcgactttgaaaccacggggctgtcg
cccaatcaaggggatcgcgcgattgaaatcggggctgtgctgattgaagacggcgtgatc
acccaaagattttctgaattaatgaacccaggatttagaataagtcgctttatcgaggac
tacacagggatcagcaatcaaatgctcagggacgcggcgccctgcaatgaagtgatggcg
cgttttgcggactttatcgccgatcacaatttagttgcccacaatgcggcgttcgatcaa
cgctttttagatgcggagtttgcccaaattcgccatcgttatcttgggcaatttggctgt
tccttgctggtggcgagacgtttgtatcaagcggcacccaatcatcagttaggtacttta
gtgcgctataaacagttaccaaccgatggcacttttcaccgcgccttagccgatgccgaa
atgaccggccatttgtggctggctatgctggcagaccttcagcaagagtttggactctgc
tcaccgacctttgagttactgcaaaaattagccaagaaaaccaaagcagaggtgccaaaa
tttttgcgtcaatacgcaggcaagtga
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