Shewanella baltica OS195: Sbal195_2609
Help
Entry
Sbal195_2609 CDS
T00622
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sbn
Shewanella baltica OS195
Brite
KEGG Orthology (KO) [BR:
sbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbn03032
]
Sbal195_2609
03400 DNA repair and recombination proteins [BR:
sbn03400
]
Sbal195_2609
Enzymes [BR:
sbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Sbal195_2609
DNA replication proteins [BR:
sbn03032
]
Prokaryotic type
DNA Topoisomerases
Sbal195_2609
DNA repair and recombination proteins [BR:
sbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Sbal195_2609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
DUF2399
DUF4355
Motif
Other DBs
NCBI-ProteinID:
ABX49777
UniProt:
A9L515
LinkDB
All DBs
Position
complement(3089064..3091706)
Genome browser
AA seq
880 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKEFIVKSSVGHIRDLPTSSTSEGNEKVKSAAEVKKMSP
EEKAQYKKVKDQQALVSRMGVNPEKGWAAKYQILPGKEKVVKELQALADSADQIYLATDL
DREGEAIAWHLQEVIGGDPSRYQRVVFNEITKSAIQDAFSKPSTLDTNMVNAQQARRFLD
RVVGFMVSPLLWKKVARGLSAGRVQSVAVRLVVERESEIKAFVPEEFWDVHAELSTPAQE
ALRMEVVKHLDAAFNPINEQQAMAAVQALSAASFTVLAREDKATQSKPSAPFITSTLQQA
ASTRLGFGVKKTMMMAQRLYEAGHITYMRTDSTNLSQEAVENLRDMIAKEFGDKYLPAEP
IRYGSKEGAQEAHEAIRPSNVHVQAATLSDMERDAQRLYELIWRQFVSCQMTPAQYDATK
LTVKAGDYELKATGRTLRFDGWTRVQTALKKKNEEDNTLPFVAQGDVLALKELQPKQHFT
KPPARYSEASLVKELEKRGIGRPSTYATIISTIQDRGYVKVENRRFYAEKMGEIVSERLV
GSFADLMSYDFTASMEQTLDDVARGELDWKKVLDGFYADFTKQLEKAELDPEEGGMRLNQ
MVMTDIKCPTCGRPMGIRTGTTGVFLGCSGYELPPKERCKTTMNLTPGVEAISENSEDAE
TDALRAKHRCSICGTAMDSYLIDEKRKLHVCGNNPICEGYEVEEGQFKIKGYEGPLIECD
RCGHDMELKNGRFGKYFGCTNSECKNTRKLLKNGEAAPPKEDPIYLPDLKCSKSDAHFVL
RDGAAGIFLAASTFPKSRETRAPLVEELVQYRELLWPKYQYLADAPVTDDEGNKAAVKFS
RKTKEQYVATEVDGKATGWSAHYVNGKWVSETTKKAKKSA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcgctagttattgtcgaatcaccggccaaagctaagactattaataaatat
cttggcaaagaattcatcgttaaatcgagcgtaggtcacatccgtgatctgccgacatca
tcgacttcagaaggcaatgaaaaggttaaatccgctgccgaagttaagaaaatgtcgcca
gaagaaaaagctcaatataaaaaggtgaaagatcagcaagcgctggtgtctcgcatgggc
gtaaaccctgaaaagggctgggcggctaagtatcaaattttgccgggcaaagaaaaggtc
gttaaagagttacaggcacttgccgattctgccgaccaaatctatctcgcaaccgactta
gaccgtgagggagaagctatcgcctggcatttgcaagaggtgattggcggtgatccttca
cggtatcaacgtgtggttttcaacgaaattactaagtctgcgattcaagacgcttttagc
aagccgtcgacactcgacactaacatggttaatgcccagcaagctcgtcgcttcttagac
agagttgtcggttttatggtgtcgccactgctgtggaaaaaagtcgctcgcggtttgtcc
gctggacgagtgcagtcggttgctgttcgcttagtggttgaacgtgaaagcgaaattaaa
gcctttgtgccggaagagttctgggatgtacatgcagagctgagtacgccagcccaagaa
gccttgcggatggaagtggttaagcatttagatgcggcctttaatcccattaatgaacag
caagcgatggcggcggttcaagcgttatcggcggcgagttttaccgtgctggcccgcgaa
gacaaagcgacccaaagcaaaccttctgccccctttattacgtcgacattgcaacaggcg
gcgagtacgcgcttaggtttcggtgtgaagaagaccatgatgatggctcagcgactttat
gaagctggtcatatcacttatatgcgtaccgactcgaccaatttgagtcaagaagccgtt
gaaaacttgcgtgatatgattgccaaagagtttggtgataaatatctacccgctgaaccc
attcgctacggttctaaagaaggcgcacaagaggctcacgaagcgattcgtccatcgaac
gtccatgtacaagcggcaaccttatcggacatggagcgtgatgcccagcgcttatatgag
ctgatttggcgtcagtttgtgtcatgtcagatgacgccagcccaatatgatgctactaag
ttgaccgtaaaagcgggtgactatgagctcaaagcaacgggacgtactttacgttttgat
ggttggactcgcgtgcaaacagcactcaagaagaaaaacgaagaagacaatacgttgcca
tttgtggcacaaggcgatgtattagcgttaaaagagttgcaacctaaacaacactttact
aaaccgcctgcacgatacagcgaagcctctttagttaaagaattagaaaaacgcggcatt
gggcgaccatcgacctatgcaactattatttcaacgattcaagatcggggttatgtaaaa
gttgagaatcgtcgtttttatgccgaaaaaatgggcgaaattgtcagcgagcgattagtc
ggcagttttgctgatttaatgagctatgactttaccgccagtatggagcaaacattagac
gatgtggctcgcggcgaattagattggaaaaaagtgctcgatggcttctatgctgacttt
actaagcaattagaaaaagcggagctggatcccgaagaaggtggcatgcgtcttaaccaa
atggtgatgacggatatcaagtgcccaacctgtggtcgccctatggggatccgcacggga
acaaccggtgttttccttggttgctctggttacgaattacctcccaaagagcgctgtaag
acaacgatgaaccttacgcctggcgttgaggcgattagcgaaaacagtgaagatgccgag
actgatgcactgcgtgcgaagcaccgctgtagtatttgcggcacagcgatggacagttac
ctaattgatgagaagcgtaagctacacgtctgtggtaacaacccgatttgtgaaggctat
gaagtcgaagaaggccaattcaagatcaaaggctatgaaggtccgctgattgagtgtgat
cgctgtggccacgacatggaactgaaaaacggccgttttggtaagtattttggttgtacc
aatagcgaatgtaaaaatacgcgcaaattattgaagaacggtgaggctgcgccaccaaaa
gaagatcctatctatttgcctgatctgaaatgcagcaaatcggatgcccatttcgtatta
cgtgatggtgcagcagggatcttcttagcggccagtactttccctaaatcacgggaaacc
cgtgcacctctggttgaggagctggttcaataccgcgagctgctgtggcctaagtatcaa
tatttagccgatgcgcccgtcactgatgacgaaggtaataaggctgcggtgaagtttagc
cgtaagacgaaagagcaatacgttgcgactgaagtcgacggtaaagccactggttggtca
gcgcattacgttaatggcaagtgggtgagtgagactaccaagaaagccaagaaaagcgca
tag
DBGET
integrated database retrieval system
