Shewanella baltica OS195: Sbal195_2940
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Entry
Sbal195_2940 CDS
T00622
Name
(GenBank) transcriptional regulator, AraC family
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sbn
Shewanella baltica OS195
Pathway
sbn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sbal195_2940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbn03000
]
Sbal195_2940
03400 DNA repair and recombination proteins [BR:
sbn03400
]
Sbal195_2940
Enzymes [BR:
sbn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Sbal195_2940
Transcription factors [BR:
sbn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Sbal195_2940
DNA repair and recombination proteins [BR:
sbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sbal195_2940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
HHH
DUF6233
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ABX50106
UniProt:
A9KUT8
LinkDB
All DBs
Position
complement(3485150..3486847)
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AA seq
565 aa
AA seq
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MSTDRSSESAIKRDEIDSVHSLESSAGLLSASICREARMSRDPRFDGKFFVGVLTTGIYC
RTVCPAVAPKEQNVRYFDSAVKAAQAGLRPCLRCRPDSAPGSNPWKGTGTTLARAISLIE
AGALAGKSSGEPASTVTQLADRLGISSRYLNKLFTEGFGTSPKQYALYRQLLFAKQLLHQ
TQLPITQVALAAGFNSIRRFNEAFKQTLQLTPTQLRKTALTKAAKEHVVGRTTGFGEIDT
LGEFVPHYGLTLYQYYRPPLDWASQLAFYRLRAVTGMEWFTPQMSHPQASDAVQIADETN
VSAEAKADENGLEYGRCFAIGKMRGTVHIIHEPKLNRFKLAIALTEDSAVDELQLMVTEV
RRILDLDADMQQIEQGLSTLPSLGLTPFSGLRIPGAGSLFEAVCRAILGQQVTVVQATKL
LNILVEAYGECFSLNGREYRLFPTPEAIREASLTELKMPGARKLALNALAAFICEHPEAS
VDDWLSVKGIGPWTIAYAKLRGLGDPNVFLHSDLIVKKHLLALYIKNNKLDETAAAAVSY
PQLCEQLSQQIAPWGSYLTFQLWHQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagatagatcgtctgagagtgcgattaagcgtgatgaaatagactcagtgcat
tcactggaatccagtgcggggctactttctgcgtctatttgccgtgaggcgaggatgagc
cgcgatccgcgttttgatggtaagttttttgtgggcgtattaacgacgggcatttattgc
cgtaccgtgtgtcccgccgtcgcgccaaaagagcagaatgtgcgttattttgattcggcc
gtgaaagccgcacaggcgggattacgcccgtgtttgcgttgtcggcccgacagtgcgcca
ggttcaaatccgtggaaaggcacaggcacgacattggcgagggccattagtttaattgaa
gctggcgcattagcggggaaatcatcgggagagcctgcctcgactgtgacacaattggct
gacagattagggatcagtagtcgttatctcaataagctctttaccgaaggttttggcact
tcgcctaaacaatatgccttatacaggcagttactgtttgcaaaacaactgctacatcaa
acccaattacctatcacccaagtcgcgctggcggcgggtttcaacagtattcgccgtttc
aatgaggcatttaagcaaaccttacaattgacgccaacgcaattaagaaagaccgcttta
accaaggcggcaaaggagcatgttgttggacgaacaacaggattcggtgaaattgatact
ttgggtgaatttgtgccgcactatggattaaccctatatcaatactatcgccccccattg
gattgggcatcgcagctggcattttatcgcttacgtgcggtgacagggatggagtggttc
acgccgcaaatgagtcacccacaagcgagtgatgcagttcagattgcagatgaaaccaat
gtttcagcagaagccaaggctgacgagaacgggctcgaatatggtcgctgttttgccatc
ggcaagatgcgcggcacagtgcacattatccatgagcctaagctgaatcgtttcaaactt
gcgattgctttgaccgaagattccgccgttgatgagctgcaattgatggtcactgaggtg
cggcgcattttagatctcgatgcggatatgcagcagattgagcaaggtttaagtacgctg
ccgagtttaggtttaacaccgttttcgggattgcgcattcctggcgcaggatctttgttt
gaagcggtttgccgcgcgattttgggccagcaagtgacggtcgtgcaggcaactaagtta
ctgaatatattggttgaagcctatggcgagtgttttagtctcaatggccgcgagtatcga
ttattcccaacacccgaggcgattcgtgaggcgagtttaactgagctaaaaatgccgggc
gcccgtaaattagcgctcaatgcgctcgcggcgtttatctgcgaacatcctgaggcgagt
gtcgatgattggcttagcgttaaaggcataggtccttggacgatagcgtatgccaagctt
cgtggcttgggcgatccaaacgtgtttttacattcggatttgattgttaaaaagcattta
ttggccttatatatcaagaacaataagttagatgaaacggccgccgcggcagtgagctat
ccccaattgtgcgagcagctgagtcaacaaattgccccgtggggcagttacttaaccttt
cagctctggcatcaataa
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