Shewanella baltica OS195: Sbal195_3051
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Entry
Sbal195_3051 CDS
T00622
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
sbn
Shewanella baltica OS195
Pathway
sbn02020
Two-component system
sbn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sbn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sbal195_3051
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sbal195_3051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbn03021
]
Sbal195_3051
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sbn02035
]
Sbal195_3051
Transcription machinery [BR:
sbn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sbal195_3051
Bacterial motility proteins [BR:
sbn02035
]
Flagellar system
Flagellar assembly proteins
Stator
Sbal195_3051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
UPF0122
HTH_23
HTH_10
Ketoacyl-synt_2
GerE
CT_C_D
Motif
Other DBs
NCBI-ProteinID:
ABX50216
UniProt:
A9KWM9
LinkDB
All DBs
Position
complement(3622589..3623302)
Genome browser
AA seq
237 aa
AA seq
DB search
MNKAAAYTCLDNKSSIVEQYAPLVKRIAHHLLARLPASVQLDDLLQAGMMGLLEASSKFD
GGKGAKFETFAGIRIRGAMLDEIRRGDWVPRSVHRNNRKVAHAIDELEQALGRDARDTEI
AEKLDMTLDEYHHILNDVSVGKIIGIEDLGVSQDILTVSDRSDDDSFEALAENQFHSALV
EAIKLLPERDALVLSLYYDEALNLKEIGAILEVSESRVSQILSQAMLRLKAKLKHWT
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagccgctgcgtatacttgtttagacaataaatcgtcgatcgttgaacagtat
gctccgttggttaaaagaattgcgcatcatttactcgccagactacctgcctccgtgcag
ttagatgatttactccaagctgggatgatggggttattagaagcatcatccaagtttgat
ggtggcaagggtgcgaaatttgaaaccttcgccggcatacgcatacgtggggccatgtta
gatgaaatccgccgcggcgattgggtccctcgttccgttcatcgtaacaaccgcaaggtt
gcacacgctatagatgagttagagcaagcgctgggtcgtgatgcacgcgacacagaaatt
gcagaaaaacttgatatgacgctcgatgagtaccatcatattcttaacgatgtttctgtc
ggaaaaatcatagggatagaagacttaggcgtatctcaggatatacttacagtgagtgat
cggtccgatgatgattcatttgaagcattagctgagaaccaatttcattctgctctggtt
gaggcaattaaattattgcctgaaagagatgcattagtgttatccctgtactacgatgaa
gcattgaatttaaaagagattggcgccattcttgaagtcagtgaatcgcgggttagccag
atattaagtcaggcaatgttgcgattgaaagctaaactcaagcactggacataa
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