Shewanella baltica OS195: Sbal195_3646
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Entry
Sbal195_3646 CDS
T00622
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
sbn
Shewanella baltica OS195
Brite
KEGG Orthology (KO) [BR:
sbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbn03009
]
Sbal195_3646
Enzymes [BR:
sbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Sbal195_3646
Ribosome biogenesis [BR:
sbn03009
]
Prokaryotic type
rRNA helicases
Sbal195_3646
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_11
AASDHPPT_N
Motif
Other DBs
NCBI-ProteinID:
ABX50808
UniProt:
A9L1L2
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All DBs
Position
4298322..4299581
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AA seq
419 aa
AA seq
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MQFEDFQLDPSLLESLNAMGHHSPTTIQQETIPSALEQRDILARAPTGTGKTASFLLPSL
QHLIDFPRRFAGQARILILTPTRELASQIHRYACHLATGQGLDIAIVTGGVPYGPQEEAL
AGNVDILVATPGRLMEYLDKGNFNAQEVDILIIDEADRMLDMGFSSVVQAIAIEAQGRKQ
NMLFSATLEGGGVQRFAREVLNDPIEIDVEAPRSEKAKIHQWIHLADDKEHKFALLCHLL
RQEDVKRTIVFVKTRDIVSSLEGQLLKVGIPCAFMRGDMEQKKRFQALSRFTKGEVNVLL
ATDVAARGIDIDDITHVINFDMPRSADTYIHRIGRTGRAGAKGTAISLAEAHDMRIVGKI
ERYIEQPLKRRVIEELRPKNKEARTPGKKKAKVKAKEAAKKTSKKEAAKKASKIARKKK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttgaagatttccagcttgaccctagcttattagagtcgcttaatgccatgggg
catcattcacccaccactattcagcaagaaactatcccttctgccctagagcaaagagat
attctcgcgcgcgccccgacaggaacaggtaaaacagcgagctttttactgccatcgttg
caacatttaatcgacttcccccgccgtttcgctgggcaagcacgtatcctgatcctcacg
ccaacccgtgagttagccagccaaatccaccgttatgcgtgtcacttagccacaggccaa
ggtttagacatagcgatcgtgaccggtggtgtgccttacggaccacaagaagaagcctta
gcaggcaacgtcgatattctggtcgcgacccctggccgcctgatggaatatttagacaaa
ggcaatttcaacgcccaagaagtcgatatcttaattatcgacgaagccgaccgcatgcta
gacatgggcttctcttctgtggtgcaagcgattgctatcgaagcccaaggccgcaaacag
aacatgctgttctctgccaccttagaaggcggcggcgtgcaacgttttgcccgcgaagtg
ttaaacgacccgattgaaatcgatgttgaagcccctcgcagtgaaaaagccaagatccac
caatggatccacttagccgatgataaagagcataaatttgccctgctatgtcatctgctg
cgccaagaagatgttaaacggacgattgtgttcgtgaaaacccgcgacatcgtttctagc
ttagaaggccagttactgaaagtcggcattccctgcgcattcatgcgtggcgatatggaa
cagaaaaaacgtttccaagccttaagtcgttttaccaaaggtgaagtgaacgtcttgctg
gcaaccgatgtggctgcacgcggtatcgatatcgacgatatcacccatgtgatcaacttc
gacatgccacgctctgccgatacctatattcaccgtatcggtcgtactggccgcgctggc
gccaaaggtactgcgatttcgttggccgaagcccacgatatgcgtatcgtcggtaaaatc
gagcgttatatcgagcaaccgttgaaacgccgcgtgatcgaagagctgcgtccaaagaac
aaagaagcgcggacaccgggtaagaaaaaagccaaagtgaaagcgaaagaagcagcgaaa
aaaaccagcaagaaagaagcggcaaagaaagcgagtaaaatcgcccgcaagaagaagtaa
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