Shewanella baltica OS195: Sbal195_4015
Help
Entry
Sbal195_4015 CDS
T00622
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sbn
Shewanella baltica OS195
Pathway
sbn03420
Nucleotide excision repair
sbn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sbal195_4015
03430 Mismatch repair
Sbal195_4015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbn03400
]
Sbal195_4015
Enzymes [BR:
sbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sbal195_4015
DNA repair and recombination proteins [BR:
sbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sbal195_4015
MMR (mismatch excision repair)
Other MMR factors
Sbal195_4015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABX51175
UniProt:
A9L4Q9
LinkDB
All DBs
Position
complement(4723913..4726081)
Genome browser
AA seq
722 aa
AA seq
DB search
MDVSSLLDGLNDKQREAVAAPQSSMLVLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAV
TFTNKAAAEMRERVEKVAGTNMGRMWIGTFHGLAHRLLRTHFQDAGLPQSFQILDSDDQV
RLIKRILKSLNLDEKQYPPRQAQGYINGKKDQGLRPKHIDAGGFPLEQNLLKIYQVYQES
CDRAGLVDFAEILLRAHELWLNKPHLLAHYQDRFKHILVDEFQDTNAIQYAWIRVLAGQT
ANVMIVGDDDQSIYGWRGAQVENLHRFLKDFPSATTIRLEQNYRSKGNILKASNALIANN
PERMGKELWTDEADGDPISLYCAFNEMDEARFIVGRINDWHEKGGNLSDCAILYRSNAQS
RVLEEALLHKGLAYRIYGGLRFFERQEIKDAMGYLRLINNKDDDAAFERVVNTPPRGIGD
RTLDILRSTARQHELTLWQASMRLLDEKVLAGRAANSVRGFMDLIMTMREDTQDMVLYRM
ADTVIQASGLKAMYEAEKGEKAHARIENLEELVTAARTFEMPEELEDMGELNGFLSHAAL
EAGEGQADAFTDAVQLMTLHSAKGLEFTMVFMAGVEEGIFPSKMALEEGDRLDEERRLCY
VGMTRAMEKLYITYAESRRIYGREDYARPSRFIKEIPPQYVDEIRLKAQVSTPMANNRFS
TQKSAATNDTGFNVGQRVNHPKFGEGKVTNFEGSGAQGRVQVSFTDFGSKWLVVAYARLE
AL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcttctttactagacggcctgaatgataagcagcgcgaggctgtcgcggca
ccgcaatctagcatgttagtgttggcgggcgcgggcagtggtaaaactcgggtgttgacc
caccgtattgcgtggctgatgcaggttgaacagcagagtccttactcgattcttgcggtg
acatttaccaataaagctgcggctgagatgcgcgagcgagttgaaaaagtcgctggcacc
aatatgggccgcatgtggattggcacgttccacggcttggcgcatcgcttgttacgcact
cacttccaagatgcgggtttaccgcaaagcttccaaatcctcgattctgacgatcaagtg
cgtttgatcaaacgtattcttaaaagcctgaatttggatgagaaacaatatcctccacgc
caagctcagggttatatcaatggtaaaaaagaccaaggattacgccctaaacatatcgat
gcgggcggttttccgcttgagcaaaatctgttaaaaatctatcaggtttaccaagagtct
tgtgatcgcgctggtttagtcgattttgccgaaattctattacgcgcccatgagttatgg
ctcaataagccgcacttgttggcccattatcaggacagatttaagcatattttggtggac
gagtttcaagataccaacgcgatccaatatgcgtggatccgtgtgctcgccggtcaaact
gccaatgtgatgatagtcggtgatgacgaccaatcgatttacggctggcgcggcgctcag
gttgaaaacttacatagattcttaaaagatttcccgagtgcgactacgattcgtctcgaa
caaaactatcgctctaagggcaatattcttaaagcttccaacgccttaatcgccaataac
ccagagcgtatgggcaaagagttgtggacggatgaagccgatggcgatccgatttcgctt
tattgtgcttttaatgaaatggacgaggcgcgctttattgtcggtcgcattaatgattgg
cacgaaaagggcggcaacctcagtgattgtgcgattttatatcgttctaacgctcagtcg
cgggtattagaagaagccttattacacaaaggtttagcctatcgcatctatggcggttta
cgcttcttcgagcgccaagaaattaaagatgctatgggttacctgcggctgatcaataac
aaagacgacgatgcggcgtttgagcgcgtggttaacacgccgccccgtggcattggcgat
cgcactttggatattttgcgctccacggcgcgccagcatgagttaaccctgtggcaggcg
agtatgcgtttgctcgacgagaaagtactcgcgggccgcgcagcaaattctgtgcgtggt
ttcatggacttaatcatgacgatgcgtgaagacactcaagatatggtgctgtatcgcatg
gctgatactgtgatccaagcttcgggtcttaaggccatgtatgaggccgaaaagggtgaa
aaagctcacgctagaatcgaaaacttagaagaactcgtcacagcggcacgtaccttcgaa
atgccagaagagctagaggacatgggcgaacttaacggttttctctcccacgcggcgctc
gaagcaggcgaaggccaagccgatgcctttaccgatgcggtgcagctaatgacgctgcat
tctgccaaagggctagagttcactatggtgttcatggcgggtgtcgaagaagggatcttc
ccgagtaaaatggcgctcgaagagggcgatagactcgatgaagaacgccgtctctgctat
gtgggcatgacccgcgcgatggaaaaactctacattacctatgcggaatcgcgccgtatt
tatggccgcgaagattacgccaggccatcgcgttttatcaaagagatcccaccgcaatat
gtggatgaaatccgcctcaaagcgcaggtttcaaccccaatggcgaataatcgttttagc
actcaaaagtcggctgccacaaacgatacaggttttaacgtcggccaacgagtcaatcac
cctaaatttggtgaaggcaaggtgaccaactttgagggcagcggtgcccaagggcgcgtg
caagtcagctttactgactttggcagcaagtggttagtcgtggcttacgctcgtttagaa
gcgctgtga
DBGET
integrated database retrieval system
