Shigella boydii Sb227 (serotype 4): SBO_0102
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Entry
SBO_0102 CDS
T00301
Symbol
pdhR
Name
(GenBank) PdhR
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbo03000
]
SBO_0102 (pdhR)
Transcription factors [BR:
sbo03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SBO_0102 (pdhR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
MarR
MarR_2
HTH_11
HTH_24
PaaX
HTH_DeoR
DUF4423
HTH_28
TrmB
HTH_41
Fe_dep_repress
HTH_36
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ABB64835
ShiBASE_China:
SBO0102
UniProt:
Q326C3
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Position
110752..111516
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AA seq
254 aa
AA seq
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MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEA
KGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLETRHALEGIAAYYAALRST
DEDKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEAAHNVVLLHLLRCMEPMLAQN
VRQNFELLYSRREMLPLVSSHRTRIFEAIMAGKPEEAREASHRHLAFIEEILLDRSREES
RRERSLRRLEQRKN
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcctacagcaaaatccgccaaccaaaactctccgatgtgattgagcagcaactggag
tttttgatcctcgaaggcactctccgcccgggcgaaaaactcccaccggaacgcgaactg
gcaaaacagtttgacgtctcccgtccctccttgcgtgaggcgattcaacgtctcgaagcg
aagggcttgttgcttcgtcgccagggtggcggcacttttgtccagagcagcctatggcaa
agcttcagcgatccgctggtggagctgctctccgaccatcctgagtcacagtatgacttg
ctcgaaacacgacacgccctggaaggtatcgccgcttattacgccgcgctgcgtagtacc
gatgaagacaaggaacgcatccgtgaactccatcacgccatagaactggcgcagcagtct
ggcgatctggacgcggaatcaaacgccgtactccagtatcagattgctgtcactgaagcg
gcccacaatgtggttctgcttcatctgctaaggtgtatggagccgatgttggcccagaat
gtccgccagaacttcgaattgctctattcgcgtcgcgagatgctgccgctggtgagtagt
caccgcacccgcatatttgaagcgattatggccggtaagccggaagaagcgcgcgaagca
tcgcatcgccatctggcctttatcgaagaaattttgctcgacagaagtcgtgaagagagc
cgccgtgagcgttctctgcgtcgtctggagcaacgaaagaattag
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