Shigella boydii Sb227 (serotype 4): SBO_0133
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Entry
SBO_0133 CDS
T00301
Symbol
yadB
Name
(GenBank) putative tRNA synthetase
KO
K01894
glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sbo01007
]
SBO_0133 (yadB)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbo03016
]
SBO_0133 (yadB)
Amino acid related enzymes [BR:
sbo01007
]
Aminoacyl-tRNA synthetase
Class I (A)
SBO_0133 (yadB)
Transfer RNA biogenesis [BR:
sbo03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SBO_0133 (yadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
Motif
Other DBs
NCBI-ProteinID:
ABB64863
ShiBASE_China:
SBO0133
UniProt:
Q325Z5
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All DBs
Position
complement(145405..146331)
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AA seq
308 aa
AA seq
DB search
MLPPYFLFKEMTDTQYIGRFAPSPSGELHFGSLIAALGSYLQARARQGRWLVRIEDIDPP
REVPGAAETILRQLEHYGLHWDGDVLWQSQRHDAYREALAWLHEQGLSYYCTCTRARIQS
IVGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGIIHADEKLAREDFIIHRRDGLF
AYNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLFGWKVPDYIHLPLALNPQGAKLS
KQNHAPALPKGDPRPVLIAALQFLGQQVEAHWQDFSVEQILQSAVKNWTLTAVPESAIVN
STFSNASC
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgctcccgccttattttttgttcaaagagatgacagacacacagtatattggccgcttc
gccccctctccttccggcgagcttcattttggctctctgatcgccgcgctcggcagctat
ttgcaggctcgcgcccggcaaggtcgctggctggtacgcatagaagatatcgacccgcct
cgtgaagttcccggtgccgcagaaactatcctgcgccagctggaacattacggtctgcac
tgggacggcgatgttctctggcaatcgcaacgtcacgacgcctatcgtgaagcactcgcc
tggttacatgaacaaggactaagttattactgcacctgtacgcgtgcgcgtattcaaagc
attgtcggtatttacgacggtcattgccgggtgttgcatcatggaccagacaacgccgca
gtgcgtatccgccagcagcatccggtcacgcaatttactgaccagctgcgcggcattatt
cacgccgacgaaaaactggcacgggaagattttatcattcatcgccgtgatgggttgttc
gcctacaacctggctgttgtggttgatgatcatttccagggcgttacagaaatagtgcgt
ggggctgatctgattgaaccaacagtaaggcaaatctcgctgtaccagctttttggctgg
aaagtgccagattacattcatctgccgctggcgcttaatccacaaggcgctaaactttcc
aagcagaatcatgcgcctgcgttgccgaaaggcgatccacgcccggtactaatcgcggca
cttcaatttctggggcagcaggtagaagcacactggcaggatttcagcgtcgagcaaatc
cttcagtcagccgtcaaaaactggacgctgaccgccgtgcccgagtcggcaattgtaaat
tcaacattctcaaatgcgtcatgctga
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