Shigella boydii Sb227 (serotype 4): SBO_0138
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Entry
SBO_0138 CDS
T00301
Symbol
mrcB
Name
(GenBank) peptidoglycan synthetase
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00550
Peptidoglycan biosynthesis
sbo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SBO_0138 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sbo01003
]
SBO_0138 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbo01011
]
SBO_0138 (mrcB)
Enzymes [BR:
sbo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
SBO_0138 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SBO_0138 (mrcB)
Glycosyltransferases [BR:
sbo01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
SBO_0138 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sbo01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
SBO_0138 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
PBP1_TM
UB2H
Transpeptidase
UvrB_inter
FtsA_C
Motif
Other DBs
NCBI-ProteinID:
ABB64868
ShiBASE_China:
SBO0138
UniProt:
Q325Z0
LinkDB
All DBs
Position
150949..153471
Genome browser
AA seq
840 aa
AA seq
DB search
MAGNDREPIGRKGKPTRPVKQKVSRRRYEDDDDYDDYDDYEDEEPMPRKGKGKGKGRKPR
GKRGWLWLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQLPAAVYGRMVNLEPDMTIS
KNEMVKLLEATQYRQVSKMTRPGEFTVQANSIEMIRRPFDFPDSKEGQVRAHLTFDGDHL
ATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPRSGFPDLLVDTLLATEDRHFYEH
DGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMALIMDAR
YSKDRILELYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIY
NPWRNPKLALERRNLVLRLLQQQQIIDQELYDMLSARPLGVQPRGGVISPQPAFMQLVRQ
ELQAKLGDKVKDLSGVKIFTTFDSVAQDAAEKAAVEGIPALKKQRKLSDLETAIVVVDRF
SGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPKIYRLNTWIADAPIAL
RQPNGLVWSPQNDDRRYSESGRVMLVDALTRSMNVPTVNLGMALGLPAVTDTWIKLGVPK
DQLHPVPAMLLGALNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAER
AVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTI
TWAGRDNNQPTKLYGASGAMSIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCSGGM
RVLPVWTSDPQSLCQQSEMQQQPSGNPFDQSSQPQQQPAQQEQKDSDGVAGWIKDMFGSN
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaatgaccgcgagccaattggacgcaaagggaaaccgacgcgtccggtcaaa
caaaaggtaagccgtcgtcgttacgaagatgacgatgattacgacgattatgatgactat
gaggatgaagaaccgatgccgcgcaaaggtaagggcaaaggcaaagggcgtaagcctcgt
ggcaaacgcggctggctatggctactgctaaaactggctatcgtttttgccgtgctgatc
gccatttacggcgtttatctcgatcaaaaaattcgtagccgtattgatggcaaggtctgg
caactgcctgcagcagtttatggccgaatggtcaatcttgagccagatatgaccatcagc
aagaacgagatggtgaagctgctggaggcgactcagtatcgtcaggtgtcgaaaatgacc
cgtcctggcgaatttaccgtgcaggccaacagcattgagatgatccgccgtccgtttgat
ttcccggacagtaaagaagggcaggtgcgtgcgcatctgacctttgatggtgatcatctg
gcgaccatcgtcaatatggagaacaaccgtcagttcggctttttccgtcttgatccgcgt
ctgatcaccatgatctcctcgccaaacggtgagcaacgtctgtttgtgccgcgcagtggt
ttccctgatttgctggtggatactttgctggcgacagaagaccgccatttctacgagcat
gatgggatcagcctctactcaattgggcgtgcggtgctggcaaacctgaccgcaggtcgc
acggtgcagggtgcgagtacgctgacgcaacagctggtgaaaaacctgttcctctccagc
gagcgctcttactggcgtaaagcgaacgaagcctacatggcgctgatcatggacgcgcgt
tacagcaaagaccgtattcttgagctgtatatgaacgaggtgtatctcggtcagagcggc
gacaacgaaatccgcggcttcccgctggcaagcttgtattactttggtcgcccggtagaa
gagctaagcctcgaccagcaggcgctgttagtcggtatggtgaaaggggcgtccatctac
aacccgtggcgtaacccgaaactggcgctggagcgacgtaatctggtgctgcgtctgctg
caacagcaacagattattgatcaagaactctatgacatgttgagtgcccgtccgctgggg
gttcagccgcgcggtggggtgatctctcctcagccagcctttatgcaactggtgcgtcag
gagctgcaggcaaaactgggcgataaggtaaaagatctctccggcgtgaagatcttcact
acctttgactcggtggcccaggacgcggcagaaaaagccgccgtggaaggcattccggca
ctgaagaaacagcgtaagttgagcgatcttgaaactgcgattgtggtcgtcgaccgcttt
agtggtgaagttcgtgcgatggtgggaggttctgagccgcagtttgcgggctacaaccgt
gcgatgcaggcgcgtcgttcgattggttcccttgcaaaaccagcgacttatctgacggct
ttaagccagccgaaaatctatcgcctgaacacgtggattgccgatgcgccaatcgcgctg
cgtcagccgaatggcctggtctggtcaccgcagaacgatgaccgtcgttatagcgaaagc
ggcagagtgatgctggtggatgcgttgacccgttcgatgaacgtgccgacggtaaatctg
gggatggcgctggggctgcctgcagttacggatacctggatcaaactgggcgtaccgaaa
gatcagctgcatccggttccggcgatgctgctgggggcgttgaacttaacgccaatcgaa
gtggcgcaggcgttccagaccatcgccagcggtggtaaccgtgcaccgctttctgcactg
cgttcggtaatcgcggaagatggcaaggtgctgtatcagagcttcccgcaggcagaacgc
gctgttccggcgcaggcggcgtatctgacactatggaccatgcagcaggtggtacaacgt
ggtacgggtcgtcagcttggggcgaaatacccgaacctgcatctggcagggaaaacaggg
actaccaacaataacgtagatacttggtttgcaggcattgacggcagcacggtgaccatc
acctgggcaggccgtgataacaaccagccgaccaaactgtatggagccagcggggcaatg
tcgatttatcagcgttatctggctaaccagacgccaacgccgctgaatcttgttccgcca
gaagatattgcagatatgggcgtggactacgacggcaactttgtttgcagcggtggcatg
cgtgtcttgccggtctggaccagcgatccgcaatcgctgtgccagcagagcgagatgcag
cagcagccgtcaggcaatccgtttgatcagtcttctcagccgcaacagcaacctgctcag
caagagcagaaagacagcgacggtgtagccggttggatcaaggatatgtttggtagtaat
taa
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