Shigella boydii Sb227 (serotype 4): SBO_0147
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Entry
SBO_0147 CDS
T00301
Symbol
yadT
Name
(GenBank) conserved hypothetical protein
KO
K06858
vitamin B12 transport system substrate-binding protein
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SBO_0147 (yadT)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbo02000
]
SBO_0147 (yadT)
Transporters [BR:
sbo02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Vitamin B12 transporter
SBO_0147 (yadT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_2
YAcAr
HEF_HK
DUF4124
Motif
Other DBs
NCBI-ProteinID:
ABB64877
ShiBASE_China:
SBO0147
UniProt:
Q325Y1
LinkDB
All DBs
Position
complement(163697..164491)
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AA seq
264 aa
AA seq
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MAKSLFRALVALSFLAPLWLNAAPRVITLSPANTELAFAAGITPVGVSSYSDYPPQAQKI
EQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASPGIKVMWVDATSIEQIANALR
QLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFLQFGINPPFTSGKESIQNQVL
EVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGPDQIPKIKQYWGEQLKIPVIPLT
SDWFDVQAHVLSSLHNSSVMRFHR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggctaagtcactgttcagggcgctggtcgccctgtcttttctcgcgccactgtggctc
aacgcggcaccgcgcgtcatcacgctttctcccgccaacactgaacttgcctttgccgcc
gggatcacgccggttggggtcagcagctattccgactatcctccacaagcgcaaaagatt
gagcaggtttccacctggcaggggatgaatctggaacgcattgtcgcgctgaaacccgat
ctggtgattgcctggcgtggaggtaatgccgagcggcaggttgaccagctggcttcgccg
ggaataaaagtgatgtgggtcgatgcgacaagcattgaacaaattgccaatgcgttacgt
caactggccccctggagtccgcaaccggataaggccgaacaagccgcgcaatccctgctg
gatcagtacgcgcaattgaaagcgcaatatgctgataaacctaaaaaacgtgtttttctg
caattcggcattaatccgccatttaccagtggaaaagagtcgattcaaaaccaggtactc
gaagtttgtggcggagaaaacatctttaaagacagccgggttccttggccgcaagttagc
cgcgaacaggtgttagcacgctcgccacaggcgattgtcattacaggcggaccggaccaa
attcctaaaatcaaacaatactggggtgaacagctcaaaattcccgttattcctctcacg
agtgactggtttgacgtgcaagcccacgtattatcctcgctgcacaacagctctgtaatg
cgctttcacaggtag
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