Shigella boydii Sb227 (serotype 4): SBO_0208
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Entry
SBO_0208 CDS
T00301
Symbol
yafV
Name
(GenBank) putative amidase-type enzyme
KO
K13566
omega-amidase [EC:
3.5.1.3
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00250
Alanine, aspartate and glutamate metabolism
sbo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SBO_0208 (yafV)
Enzymes [BR:
sbo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.3 omega-amidase
SBO_0208 (yafV)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CN_hydrolase
Motif
Other DBs
NCBI-ProteinID:
ABB64930
ShiBASE_China:
SBO0208
UniProt:
Q325S8
LinkDB
All DBs
Position
complement(223973..224743)
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AA seq
256 aa
AA seq
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MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQD
DVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTVHFYDKRHLFRMADEHLHY
KAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLAIYVANWPAPRSLHWQALLTAR
AIENQAYVAECNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMMALREY
REKFPAWQDADEFRLR
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
gtgcctggtttgaagattacgcttttgcagcaaccactggtgtggatggatggccctgcc
aacctgcgtcattttgatcgtcaactggaaggtattaccgggcgcgatgtgatcgttcta
ccggagatgtttaccagcggctttgccatggaagcggcagcttcgtcgctagcacaagat
gacgtagtgaactggatgacagctaaggcgcagcagtgcaatgcgctgatagcaggcagt
gttgcattacaaacggagtctggttcggttaaccgctttttgctggttgagccgggcggc
acggtacatttttatgataagcgtcatctgttccgcatggcagatgagcatctacattat
aaagcgggcaatgcgcgagtgattgtggaatggcgcggctggcgtattttgccgttggtg
tgctacgacttacgttttccggtgtggtcgcgcaatctcaacgattatgacctcgccatc
tacgttgccaactggcctgctccgcgctctctgcactggcaggcattgctgacggcccgc
gcgattgagaatcaggcgtatgtggcggaatgcaatcgcgtcggcagcgatggcaacggc
tgccattatcgcggtgacagccgggtgattaatccacaaggcgagattatcgctactgcc
gacgcgcatcaggcaacgcgcattgatgcggagctgtcgatgatggcattgcgggaatat
agagaaaagtttccggcatggcaggatgcggatgagtttaggttgcggtga
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