Shigella boydii Sb227 (serotype 4): SBO_0419
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Entry
SBO_0419 CDS
T00301
Symbol
ybbF
Name
(GenBank) conserved hypothetical protein
KO
K03269
UDP-2,3-diacylglucosamine hydrolase [EC:
3.6.1.54
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00540
Lipopolysaccharide biosynthesis
sbo01100
Metabolic pathways
Module
sbo_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SBO_0419 (ybbF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sbo01005
]
SBO_0419 (ybbF)
Enzymes [BR:
sbo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.54 UDP-2,3-diacylglucosamine diphosphatase
SBO_0419 (ybbF)
Lipopolysaccharide biosynthesis proteins [BR:
sbo01005
]
Lipid A
SBO_0419 (ybbF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
AP5B1_C
Motif
Other DBs
NCBI-ProteinID:
ABB65127
ShiBASE_China:
SBO0419
UniProt:
Q324Y1
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All DBs
Position
434574..435296
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AA seq
240 aa
AA seq
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MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRQMA
AAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCT
DDAGYQAFRAKVHKPWLQMLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVV
SAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacactctttattgcagatcttcatctctgcgtggaagaaccggcgatcaccgcc
ggttttctgcgttttttagcgggggaagctcgcaaggccgacgcgctgtatattcttggc
gatctgtttgaagcgtggattggcgacgacgatcccaatccactccatcgccagatggcg
gcagcgatcaaagcggtgtccgattccggcgttccctgttatttcattcatggcaaccgt
gattttctgctcggcaaacgctttgcccgtgaaagcggcatgacattattgccggaagaa
aaggtgctcgaactttatggtcgccgggtgttgattatgcatggcgacacgctgtgcacc
gatgacgcgggttatcaggcttttcgcgccaaagtccacaaaccctggctgcaaatgcta
ttcctcgccctgccgttgtttgtgcgcaaacgcattgccgcgcgaatgcgcgcgaacagc
aaagaagccaacagcagtaaatcgctggcgatcatggacgttaaccaaaacgcagtggtc
agtgcgatggaaaaacatcaggtgcaatggctgatccacgggcatacccatcgcccggcg
gtgcatgaacttatcgccaaccagcaacctgcttttcgcgtggtactgggtgcctggcat
acggaaggttcgatggtgaaagtcacggcggatgacgttgagctgattcattttccgttt
taa
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