Shigella boydii Sb227 (serotype 4): SBO_0567
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Entry
SBO_0567 CDS
T00301
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbo03400
]
SBO_0567 (phrB)
Enzymes [BR:
sbo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SBO_0567 (phrB)
DNA repair and recombination proteins [BR:
sbo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SBO_0567 (phrB)
Prokaryotic type
SBO_0567 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABB65256
ShiBASE_China:
SBO0567
UniProt:
Q324K2
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All DBs
Position
587560..588978
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AA seq
472 aa
AA seq
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MTTHLVWFRQDLRLHDNLALAAACSNSSARVLALYIATPRQWATHNMSPRQAELINAQLN
GLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERARDVEVERA
LRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLREGMPECVAAPKVRSSGS
IEPSPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQNGAGEYEQQRDFPAVEGTSRLSA
SLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLSELIWREFYRHLMTYYPSLCKHCPFIA
WTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRMITASFLVKDLLIDW
REGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDREGEFIRRWL
PELRDVPGKAVHEPWKWAQKAGVMLDYPQPIVDHKEARLRTLAAYEEARKGA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgactacccatctggtctggtttcgccaggatttacgtttgcacgataatctcgcactg
gctgccgcctgcagcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgc
cagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaat
gggctacaaatagcgcttgcggaaaaaggtattcctttattgttccgtgaagtggatgac
tttgtcgccagtgtcgaaatagttaaacaggtgtgcgcggaaaacagcgttacccacctg
ttttataactatcagtatgaagtgaatgagcgggcgcgggatgtggaagttgaaagagcg
ctgcgtaacgtggtgtgtgaaggatttgatgacagcgtgatcctgccgcctggcgcggtg
atgaccggtaatcacgagatgtacaaagtctttacgccttttaagaatgcctggctgaaa
cggctgcgggaagggatgccggagtgcgtcgctgcgccaaaagttcgtagtagcggatcg
atagagccctcgccatccattacgctgaattatcctcgtcagtctttcgatactgcgcat
ttcccggtggaagaaaaagcggcgattgcgcaattacgccagttttgccagaacggtgcc
ggagaatatgagcaacaacgagattttccggcagtggaaggcaccagtcgtttgtccgcc
agcctggcaacgggcgggttatcgcctcgccagtgtttgcatcgcttgttggcggaacag
ccgcaggcgctggacggtggggccggtagtgtctggcttagtgagctgatctggcgcgag
ttctaccgtcatctgatgacgtattacccctcgttgtgtaaacattgtccgtttattgcc
tggacggatcgtgtgcagtggcagagcaatcccgcacatttacaggcctggcaggaaggc
aaaacgggatacccgattgtcgatgctgccatgcgtcagcttaacagcactggctggatg
cataaccggctacggatgattacagccagttttctggtgaaagatttgttgatcgactgg
cgcgaaggcgagcgatatttcatgtcgcagctgattgatggtgatttggcagccaataac
ggtggctggcagtgggccgcttcaaccggaaccgatgcagcgccgtattttcgtattttc
aacccgacaacccagggcgagaaatttgaccgtgagggcgagtttattcgtcgatggtta
ccggagctgcgcgatgtaccagggaaagcggtgcatgagccgtggaagtgggcgcagaaa
gcaggtgtgatgctggattatccgcaaccgatagttgatcacaaagaggcaaggctgcga
acgctggcagcgtacgaagaagcgaggaaaggagcctga
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