KEGG   Shigella boydii Sb227 (serotype 4): SBO_0825
Entry
SBO_0825          CDS       T00301                                 
Symbol
ycaJ
Name
(GenBank) putative polynucleotide enzyme
  KO
K07478  putative ATPase
Organism
sbo  Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:sbo00001]
 09190 Not Included in Pathway or Brite
  09192 Unclassified: genetic information processing
   99976 Replication and repair
    SBO_0825 (ycaJ)
SSDB
Motif
Pfam: MgsA_C AAA_assoc_2 AAA RuvB_N AAA_5 AAA_16 Mg_chelatase nSTAND3 AAA_22 AAA_19 Sigma54_activat AAA_30 AAA_14 AAA_3 RNA_helicase AAA_2 ABC_tran ATP-synt_ab DUF815 Sigma54_activ_2 AAA_28 AAA_24 Cdc6_lid AAA_11 AAA_18 RCF1-5-like_lid AAA_33 DNA_pol3_delta2 AAA_25 NACHT IstB_IS21 Resolvase NPHP3_N TsaE NTPase_1 Parvo_NS1 AAA_17 TIP49 UvrD-helicase cobW DUF5906 HisZ-like
Other DBs
NCBI-ProteinID: ABB65497
ShiBASE_China: SBO0825
UniProt: Q323L1
LinkDB
Position
840833..842176
AA seq 447 aa
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG
TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK
SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED
KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI
AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS
EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA
RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPREIAQTRYYFPTN
RGLEGKIGEKLAWLAEQDQNSPIKRYR
NT seq 1344 nt   +upstreamnt  +downstreamnt
gtgagcaatctgtcgctcgatttttcggataatacttttcaacctctggccgcgcgtatg
cggccagaaaatttagcacagtatatcggccagcaacatttgctggctgcggggaagccg
ttgccgcgcgctatcgaagccgggcatctgcattctatgatcctctgggggccaccgggt
accggcaaaacaactctcgctgaagtgattgcccgctatgcgaacgctgatgtggaacgt
atttctgccgtcacctctggcgtgaaagagattcgcgaggcgatcgagcgcgcccggcaa
aaccgcaatgcaggtcgccgcactattctttttgttgacgaagttcaccgtttcaacaaa
agccagcaggatgcatttctgccacatattgaagacggcaccatcacttttattggcgca
accactgaaaacccgtcgtttgagcttaattcggcactgctttcccgtgcccgtgtctat
ctgttgaaatccctgagtacagaggatattgagcaagtactaactcaggcgatggaagac
aaaacccgtggctatggtggtcaggatattgttctgccagatgaaacacgacgcgccatt
gctgaactggtgaatggcgacgcgcgccgggcgttaaatacgctggaaatgatggcggat
atggccgaagtcgatgatagcggtaagcgggtcctgaagcctgaattactgaccgaaatc
gcaggtgaacgtagtgcccgctttgataacaaaggtgatcgcttttacgatctcatttcc
gcactgcataaatcggtacgtggtagcgcacccgatgcggcgctgtactggtatgcgcga
attattactgccggtggcgatccgttatatgttgcgcgtcgctgtctggcgattgcgtct
gaagatgtgggtaatgctgatccacgagcgatgcaggtggcaattgcagcctgggattgc
tttactcgcgttggcccggcggaaggtgaacgcgccattgctcaggcgattgtttacctg
gcctgcgcgccaaaaagcaacgctgtctacactgcgtttaaagctgcgctggcggatgct
cgcgaacgtccggattatgacgtgccggttcatttgcgtaatgcgccgacgaaattaatg
aaggaaatgggctacgggcaggaatatcgttacgctcatgatgaagcaaacgcttatgct
gccggtgaggtttacttcccgcgggaaatagcacaaacacgctattatttcccgacaaac
aggggccttgaaggcaagattggcgaaaagctcgcctggctggctgaacaggatcaaaat
agccccataaaacgctaccgttaa

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