Shigella boydii Sb227 (serotype 4): SBO_0825
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Entry
SBO_0825 CDS
T00301
Symbol
ycaJ
Name
(GenBank) putative polynucleotide enzyme
KO
K07478
putative ATPase
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
SBO_0825 (ycaJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
AAA_16
Mg_chelatase
nSTAND3
AAA_22
AAA_19
Sigma54_activat
AAA_30
AAA_14
AAA_3
RNA_helicase
AAA_2
ABC_tran
ATP-synt_ab
DUF815
Sigma54_activ_2
AAA_28
AAA_24
Cdc6_lid
AAA_11
AAA_18
RCF1-5-like_lid
AAA_33
DNA_pol3_delta2
AAA_25
NACHT
IstB_IS21
Resolvase
NPHP3_N
TsaE
NTPase_1
Parvo_NS1
AAA_17
TIP49
UvrD-helicase
cobW
DUF5906
HisZ-like
Motif
Other DBs
NCBI-ProteinID:
ABB65497
ShiBASE_China:
SBO0825
UniProt:
Q323L1
LinkDB
All DBs
Position
840833..842176
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AA seq
447 aa
AA seq
DB search
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG
TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK
SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED
KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI
AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS
EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA
RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPREIAQTRYYFPTN
RGLEGKIGEKLAWLAEQDQNSPIKRYR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaatctgtcgctcgatttttcggataatacttttcaacctctggccgcgcgtatg
cggccagaaaatttagcacagtatatcggccagcaacatttgctggctgcggggaagccg
ttgccgcgcgctatcgaagccgggcatctgcattctatgatcctctgggggccaccgggt
accggcaaaacaactctcgctgaagtgattgcccgctatgcgaacgctgatgtggaacgt
atttctgccgtcacctctggcgtgaaagagattcgcgaggcgatcgagcgcgcccggcaa
aaccgcaatgcaggtcgccgcactattctttttgttgacgaagttcaccgtttcaacaaa
agccagcaggatgcatttctgccacatattgaagacggcaccatcacttttattggcgca
accactgaaaacccgtcgtttgagcttaattcggcactgctttcccgtgcccgtgtctat
ctgttgaaatccctgagtacagaggatattgagcaagtactaactcaggcgatggaagac
aaaacccgtggctatggtggtcaggatattgttctgccagatgaaacacgacgcgccatt
gctgaactggtgaatggcgacgcgcgccgggcgttaaatacgctggaaatgatggcggat
atggccgaagtcgatgatagcggtaagcgggtcctgaagcctgaattactgaccgaaatc
gcaggtgaacgtagtgcccgctttgataacaaaggtgatcgcttttacgatctcatttcc
gcactgcataaatcggtacgtggtagcgcacccgatgcggcgctgtactggtatgcgcga
attattactgccggtggcgatccgttatatgttgcgcgtcgctgtctggcgattgcgtct
gaagatgtgggtaatgctgatccacgagcgatgcaggtggcaattgcagcctgggattgc
tttactcgcgttggcccggcggaaggtgaacgcgccattgctcaggcgattgtttacctg
gcctgcgcgccaaaaagcaacgctgtctacactgcgtttaaagctgcgctggcggatgct
cgcgaacgtccggattatgacgtgccggttcatttgcgtaatgcgccgacgaaattaatg
aaggaaatgggctacgggcaggaatatcgttacgctcatgatgaagcaaacgcttatgct
gccggtgaggtttacttcccgcgggaaatagcacaaacacgctattatttcccgacaaac
aggggccttgaaggcaagattggcgaaaagctcgcctggctggctgaacaggatcaaaat
agccccataaaacgctaccgttaa
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