Shigella boydii Sb227 (serotype 4): SBO_0826
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Entry
SBO_0826 CDS
T00301
Symbol
serS
Name
(GenBank) serine tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SBO_0826 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sbo01007
]
SBO_0826 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbo03016
]
SBO_0826 (serS)
Enzymes [BR:
sbo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
SBO_0826 (serS)
Amino acid related enzymes [BR:
sbo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SBO_0826 (serS)
Transfer RNA biogenesis [BR:
sbo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SBO_0826 (serS)
Prokaryotic type
SBO_0826 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Filament
CENP-F_leu_zip
UPF0242
Cep57_CLD_2
DUF3450
Motif
Other DBs
NCBI-ProteinID:
ABB65498
ShiBASE_China:
SBO0826
UniProt:
Q323L0
LinkDB
All DBs
Position
842267..843559
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AA seq
430 aa
AA seq
DB search
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ
AKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDN
VEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFM
LDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEV
PLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPED
SMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCS
NVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLR
PYMNGLEYIG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcccaatctgctgcgtaatgagccagacgcagtcgctgaaaaactggcacgc
cggggctttaagctggatgtagataagctgggcgctctcgaagagcgtcgtaaagtattg
caggtcaaaacggaaaacctgcaagcggagcgtaactcccgatcgaaatccattggccag
gcgaaagcgcgcggggaagatatcgagcctttacgtctggaagtgaacaaactgggcgaa
gagctggatgcagcaaaagccgagctggatgctttacaggctgaaattcgcgatatcgcg
ctgaccatccctaacctgcctgcagatgaagtgccggtaggtaaagacgaaaatgacaac
gttgaagtcagccgctggggtaccccgcgtgagtttgactttgaagttcgtgaccacgtg
acgctgggtgaaatgcactctggcctcgactttgcagctgcagttaagctgactggttcc
cgctttgtggtaatgaaagggcagattgctcgcatgcaccgcgcactgtcgcagtttatg
ctggatctgcataccgaacagcatggctacagtgagaactatgttccgtacctggttaac
caggacacgctgtacggtacgggtcagctgccgaaatttgctggcgatctgttccatact
cgtccgctggaagaagaagcagacaccagtaactatgcgctgatcccaacggcagaagtt
ccgctgactaacctggtgcgcggtgaaatcatcgatgaagatgatctgccaattaagatg
accgcccacaccccatgcttccgttctgaagccggttcatatggtcgtgacacccgtggt
ctgatccgtatgcaccagttcgacaaagttgaaatggtgcagatcgtgcgcccggaagac
tcaatggcggcgctggaagagatgactggtcatgcagaaaaagtcctgcagctgctgggc
ctgccgtaccgtaaaatcatcctttgtaccggcgacatgggctttggcgcttgcaaaacc
tatgacctggaagtatggatcccggcacagaacacctaccgtgagatctcttcctgctcc
aacgtttgggatttccaggcacgtcgtatgcaggcacgttgccgcagcaagtcggacaag
aaaacccgtctggttcataccctgaacggttctggtctggctgttggtcgtacgctggtt
gcagtaatggaaaactatcagcaggctgatggtcgtattgaagtaccagaagttctgcgt
ccgtatatgaacggactggaatatattggctaa
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