Shigella boydii Sb227 (serotype 4): SBO_1159
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Entry
SBO_1159 CDS
T00301
Symbol
edd
Name
(GenBank) 6-phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00030
Pentose phosphate pathway
sbo01100
Metabolic pathways
sbo01120
Microbial metabolism in diverse environments
sbo01200
Carbon metabolism
Module
sbo_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
SBO_1159 (edd)
Enzymes [BR:
sbo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
SBO_1159 (edd)
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Gene cluster
GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
zf-A20
Motif
Other DBs
NCBI-ProteinID:
ABB65794
ShiBASE_China:
SBO1159
UniProt:
Q322G4
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Position
complement(1157884..1159695)
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AA seq
603 aa
AA seq
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MNPQLLRVTNRIIERSRETRSAYLARIEQAKTSTVHRSQLACGNLAHGFAACQPEDKASL
KSMLRNNIAIITSYNDMLSAHQPYEHYPEIIRKALHEANAVGQVAGGVPAMCDGVTQGQD
GMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPGLTMAALSFGHLPAVFVPSGP
MASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAPGTCTFYGTANTNQMVVEFMGMQ
SPGSSFVHPDSPLRDALTAAAARQVTRMTGNGNEWMPIGKMIDEKVVVNGIVALLATGGS
TNHTMHLVAMARAAGIQINWDDFSDLSDVVPLMARLYPNGPADINHFQAAGGVPVLVREL
LKAGLLHEDVNTVAGFGLSRYTLEPWLNNGELDWREGAEKSLDSNVIASFEQPFSHHGGT
KVLSGNLGRAVMKTSAVPVENQVIEAPAVVFESQHDVMPAFEAGLLDRDCVVVVRHQGPK
ANGMPELHKLMPPLGVLLDRCFKIALVTDGRLSGASGKVPSAIHVTPEAYDGGLLAKVRD
GDIIRVNGQTGELTLLVDEAELAAREPHIPDLSASRVGTGRELFSALREKLSGAEQGATC
ITF
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaatccacaattgttacgcgtaacaaatcgaatcattgaacgttcgcgcgagactcgc
tctgcttatctcgcccggatagaacaagcgaaaacgtcgaccgttcatcgttcgcagttg
gcatgcggtaacctggcacacggtttcgctgcctgccagccagaagacaaagcctctttg
aaaagcatgttgcgtaacaatatcgccatcatcacctcctataacgacatgctctccgcg
caccagccttatgaacactatccagaaatcattcgtaaagccctgcatgaagcgaatgcg
gttggtcaggttgcgggcggtgttccggcgatgtgtgatggtgtcacccaggggcaggat
ggaatggaattgtcgctgctaagccgcgaagtgatagcgatgtctgcggcggtggggctg
tcccataacatgtttgatggtgctctgttcctcggtgtgtgcgacaagattgtcccgggt
ctgacgatggcagccctgtcgtttggtcatttgcctgcggtgtttgtgccgtctggaccg
atggcaagcggtttgccaaataaagaaaaagtgcgtattcgccagctttatgccgaaggt
aaagtggaccgcatggccttactggagtcagaagccgcgtcttaccatgcgccgggaaca
tgtactttctacggtactgccaacaccaaccagatggtggtggaatttatggggatgcag
tcgccaggctcttcttttgttcatccggattctccgctgcgcgatgctttgaccgctgcc
gctgcgcgtcaggttacacgcatgaccggtaatggtaatgaatggatgccgatcggtaag
atgatcgatgagaaagtggtggtgaacggtatcgttgcactgctggcgaccggtggttcc
actaaccacaccatgcacctggtggcgatggcgcgcgcggccggtattcagattaactgg
gatgacttctctgacctttctgatgttgtaccgctgatggcacgtctctacccgaacggt
ccggccgatattaaccacttccaggcggcaggtggcgtaccggttctggtgcgtgaactg
ctcaaagcaggcctgctgcatgaagatgtcaatacggtggcaggctttggtctgtctcgt
tatacccttgaaccatggctgaataatggtgaactggactggcgggaaggggcggaaaaa
tcactcgacagcaatgtgatcgcttccttcgaacaacctttctctcatcatggtgggaca
aaagtgttaagcggtaacctgggccgtgcggttatgaaaacctctgccgtgccggttgag
aaccaggtgattgaagcgccagcggttgtttttgaaagccagcatgacgttatgccggcc
tttgaagcgggtttgctggaccgcgattgtgtcgttgttgtccgtcatcaggggccaaaa
gcgaacggaatgccagaattacataaactcatgccgccacttggtgtattattggaccgg
tgtttcaaaattgcgttagttaccgatggacgactctccggcgcttcaggtaaagtgccg
tcagctatccacgtaacaccagaagcctacgatggcgggctgctggcaaaagtgcgcgac
ggggacatcattcgtgtgaatggacagacaggcgaactgacgctgctggtagacgaagcg
gaactggctgctcgcgaaccgcacattcctgacctgagcgcgtcacgcgtgggaacagga
cgtgaattattcagcgccttgcgtgaaaaactgtccggtgccgaacagggcgcaacctgt
atcactttttaa
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