Shigella boydii Sb227 (serotype 4): SBO_1213
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Entry
SBO_1213 CDS
T00301
Symbol
erfK
Name
(GenBank) conserved hypothetical protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbo01002
]
SBO_1213 (erfK)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbo01011
]
SBO_1213 (erfK)
Peptidases and inhibitors [BR:
sbo01002
]
Cysteine peptidases
Family C82
SBO_1213 (erfK)
Peptidoglycan biosynthesis and degradation proteins [BR:
sbo01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SBO_1213 (erfK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
Motif
Other DBs
NCBI-ProteinID:
ABB65847
ShiBASE_China:
SBO1213
UniProt:
Q322B1
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All DBs
Position
1211433..1212365
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AA seq
310 aa
AA seq
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MRRVNIFCSFALLFASHTSLAVTYPLPPEGSRLVGQSYTVTVPDHNTQPLETFAAQNGQG
LSNMLEANPGADVFLPKSGSQLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEVF
PIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLY
AIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTE
PDGSNWLEVHEPLSRNRAEYEFDRKVPLPVTPSLRAFISGQEVDVNRANAALQRRSGMPV
PISSGSRQMF
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgtgtaaatattttttgctcatttgctctgctttttgccagccatactagcctg
gcggtaacttacccattacctccagagggtagccgtttagtggggcagtcgtatactgta
actgttcctgatcacaatacccagccgctggagacttttgccgcacaaaacgggcaaggg
ttaagtaacatgctggaagcgaacccgggtgctgatgttttcttgccgaagtccggctcg
caactcaccattccgcagcaactgattttgcccgccactgttcgtaaagggattgtggtt
aacgtcgctgagatgcgtctttattactacccaccagacagtaatactgtggaagtcttt
cctattggtatcggccaggctgggcgagaaaccccgcgtaactgggtgactaccgttgaa
cgtaaacaagaagctccaacctggacgccaacgccgaacactcggcgcgaatatgcgaaa
cgaggggagagtttgcccgcatttgttcctgcgggccccgataatcccatggggctgtac
gcgatttatattggcaggttgtatgccatccatggtaccaatgccaattttggtattggg
ctccgggtaagtcagggctgtattcgtctgcgcaatgacgatatcaaatatctgtttgat
aatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaa
ccagatggctcgaactggctggaagttcatgagccgttgtcgcgcaatcgtgcagaatat
gagtttgaccgaaaagtgccattgccggtaaccccatctttgcgggcgtttatcagcggg
caagaagttgatgtaaatcgcgcaaatgctgcgttgcaacgtcgatcgggaatgcctgtg
ccaattagttctggttcaagacagatgttttaa
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