Shigella boydii Sb227 (serotype 4): SBO_1283
Help
Entry
SBO_1283 CDS
T00301
Symbol
fadD
Name
(GenBank) acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00061
Fatty acid biosynthesis
sbo00071
Fatty acid degradation
sbo01100
Metabolic pathways
sbo01212
Fatty acid metabolism
sbo02024
Quorum sensing
sbo04146
Peroxisome
Module
sbo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SBO_1283 (fadD)
00071 Fatty acid degradation
SBO_1283 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SBO_1283 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SBO_1283 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbo01004
]
SBO_1283 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbo04147
]
SBO_1283 (fadD)
Enzymes [BR:
sbo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SBO_1283 (fadD)
Lipid biosynthesis proteins [BR:
sbo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SBO_1283 (fadD)
Exosome [BR:
sbo04147
]
Exosomal proteins
Exosomal proteins of breast milk
SBO_1283 (fadD)
Exosomal proteins of breast cancer cells
SBO_1283 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_2
Asp_protease_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ABB65911
ShiBASE_China:
SBO1283
UniProt:
Q321U7
LinkDB
All DBs
Position
1271842..1273527
Genome browser
AA seq
561 aa
AA seq
DB search
MKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVNMGEVMTFRKLEERSRA
FAAYLQQGVGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDS
GASAVVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAKGTVVNFVVKYIKRLVPKYHL
PDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNA
TYGPLLHPGKELVVTALPLYHIFALTINCLLFIELGGQNLLITNPRDIPGLVKELAKYPF
TAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLLEGYGLT
ECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCVKGPQVMLGYWQ
RPDATDEIIKNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGV
QEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKSN
VGKILRRELRDEARGKVDNKA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaggtttggcttaaccgttatcccgcggacgttccgacggagatcaaccctgac
cgttatcaatctctggtagatatgtttgagcagtcggtcgcgcgctacgccgatcagcct
gcgtttgtgaatatgggggaggtgatgaccttccgcaagctggaagaacgcagtcgcgcg
tttgccgcttatttgcaacaaggggtggggctgaagaaaggcgatcgcgttgcgttgatg
atgcctaatttattgcaatatccggtggcgctgtttggcattttgcgtgccgggatgatc
gtcgtaaacgttaacccgttgtataccccgcgtgagcttgagcatcagcttaacgatagc
ggcgcatcggcggttgttatcgtgtctaactttgctcacacactggaaaaagtggttgat
aaaaccgccgttcagcacgtaattctgacccgtatgggcgatcagctatctacggcaaaa
ggcacggtagtcaatttcgttgttaaatacatcaagcgtttggtgccgaaataccatctg
ccagatgccatttcatttcgtagcgcactgcataacggctaccggatgcagtacgtcaaa
cccgaactggtgccggaagatttagccttcctgcaatacaccggcggcaccacaggtgtg
gcgaaaggcgcgatgctgactcaccgcaatatgctggcgaacctggaacaggtcaacgcc
acctatgggccgttgctgcatccaggtaaagaactggtagtaacggcactgccgctgtat
cacatttttgccctgaccattaactgcctgctgtttatcgaactgggtgggcaaaacctg
cttatcactaacccgcgtgatattccagggttggtaaaagagttagcgaaatatccgttt
accgctatcactggcgttaacaccttgttcaatgcgttgctgaacaataaagagttccag
cagctggatttctccagtctgcatctttccgcaggcggtgggatgccagtgcagcaagtg
gtggcagagcgttgggtgaaactgaccggacagtatctgctggaaggctatggccttacc
gagtgtgcgccgctggtcagcgttaacccatatgatattgattatcatagtggtagcatc
ggtttgccggtgccgtcgacggaagccaaactggtggatgatgatgataatgaagtacca
ccaggtcaaccgggtgagctttgtgtcaaaggaccgcaggtgatgctgggttactggcag
cgtcccgatgctaccgatgaaatcatcaaaaatggctggttacacaccggcgacatcgcg
gtaatggatgaagaaggattcctgcgcattgtcgatcgtaaaaaagacatgattctggtt
tccggttttaacgtctatcccaacgagattgaagatgtcgtcatgcagcatcctggcgta
caggaagtcgcggctgttggcgtaccttccggctccagtggtgaagcggtgaaaatcttc
gtagtgaaaaaagatccatcgcttaccgaagagtcactggtgactttttgccgccgtcag
ctcacgggatacaaagtaccgaagctggtggagtttcgtgatgagttaccgaaatctaac
gtcggaaaaattttgcgacgagaattacgtgacgaagcgcgcggcaaagtggacaataaa
gcctga
DBGET
integrated database retrieval system
