Shigella boydii Sb227 (serotype 4): SBO_1570
Help
Entry
SBO_1570 CDS
T00301
Name
(GenBank) putative hemin-binding lipoprotein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SBO_1570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbo02000
]
SBO_1570
Transporters [BR:
sbo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SBO_1570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
OpuAC
Motif
Other DBs
NCBI-ProteinID:
ABB66182
ShiBASE_China:
SBO1570
UniProt:
Q320S6
LinkDB
All DBs
Position
1564427..1565977
Genome browser
AA seq
516 aa
AA seq
DB search
MKRSIPFRPTLLALVLATTFPVAHAAVPKDMLVIGKAADPQTLAPAVTIDNNDWTVTYPS
YQRLVQYKTDGDKGSTDVEGDLASSWKASDDQKEWTFTLKDNAKFADGTPVTAEAVKLSF
ERLLKIGQGPAEAFPKDLKIDAPDEHTVKFTLSQPFAPFLYTLANDGASIINPAVLKEHA
ADDARGFLAQNTAGSGPFMLKSWQKGQQLVLVPNPHYPGNKPNFKRVSVKIIGESASRRL
QLSRGDIDIADALPVDQLNALKQENKVNVAEYPSLRVTYLYLNNSKAPLNQADLRRAISW
STDYQGMVNGILSGNGKQMRGPIPEGMWGYDATAMQYNHDETKAKAEWDKVTSKPTSLTF
LYSDKDPNWEPIALATQSSLNKLGINVKLEKLANATMRDRVGKGDYDIAIGNWSPDFADP
YMFMNYWFESDKKGLPGNRSFYENSEVDKLLRNALATTDQTQRTRDYQQAQKIVIDDAAY
VYLFQKNYQLAMNKEVKGFVFNPMLEQVFNINTMSK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaagagatcgataccgtttcgtcctacattgctcgcgctcgtccttgccacaactttc
ccggttgcgcacgccgccgtaccgaaagatatgctggtgattggtaaggccgccgatcca
caaaccctcgccccggcggtaacaatagataataacgactggacggtgacctacccgtct
tatcagcggctggttcagtacaaaacggacggtgataaaggctcaaccgacgttgaaggc
gatctggcaagtagctggaaagcgtctgacgatcaaaaagagtggacgttcaccctgaag
gacaatgctaaatttgccgatggcacaccggtcactgccgaagcagtaaaactctctttt
gagcggctactaaaaatcggccaggggccagcagaagcatttcccaaagatttaaagatt
gatgctcccgacgaacatacggtgaagtttacccttagccagccattcgcaccgttcctc
tacacgctggcgaatgacggtgcatccattatcaatccggcggtgttaaaggaacatgca
gcggatgatgcccgcggcttcctcgcgcaaaataccgccggttccggaccatttatgctg
aaaagctggcaaaaaggtcagcaattagttctggtgccaaatccgcattaccctggcaat
aaaccgaactttaagcgagtatcggtaaaaattattggtgaaagtgcctcccgtcgcctg
cagctctcccgtggtgatattgacattgccgatgcgctgccggtggatcaactcaacgcc
ctgaagcaggaaaacaaagtcaatgtggcagagtatccgtcactgcgcgtcacctacctg
tatctgaataacagcaaagcgcctcttaatcaggcggatctgcgtcgggccatttcctgg
tctaccgattatcagggcatggttaacggcattctgagtggtaacggaaaacagatgcgc
ggcccgattccggaaggcatgtggggctacgatgcgacggcaatgcaatacaaccatgac
gaaacgaaagccaaagccgaatgggataaagtgacgagcaaacccaccagcctgacgttt
ctctactccgataaggatccgaactgggagcctattgctctggcgacacaatccagtctc
aacaagctgggcatcaatgtgaagctggaaaagctggcgaacgccaccatgcgcgacaga
gtgggtaaaggtgattacgacattgcgattggcaactggagtccggattttgccgacccg
tatatgtttatgaattactggtttgagtcagacaaaaaaggtctgccgggtaaccgctcg
ttctatgaaaacagtgaggtcgataagttactgcgcaatgcgcttgcgaccaccgaccag
acgcagcgtacccgggactaccagcaggcacagaaaatcgtcattgatgacgctgcttat
gtgtacctgttccagaaaaactaccaactggcgatgaacaaagaggtgaaaggctttgtg
ttcaatcccatgctggaacaggtcttcaatatcaataccatgagtaaataa
DBGET
integrated database retrieval system
