Shigella boydii Sb227 (serotype 4): SBO_1797
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Entry
SBO_1797 CDS
T00301
Symbol
yciL
Name
(GenBank) conserved hypothetical protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbo03009
]
SBO_1797 (yciL)
Enzymes [BR:
sbo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
SBO_1797 (yciL)
Ribosome biogenesis [BR:
sbo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SBO_1797 (yciL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABB66396
ShiBASE_China:
SBO1797
UniProt:
Q31ZW2
LinkDB
All DBs
Position
complement(1775977..1776849)
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AA seq
290 aa
AA seq
DB search
MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEVTPGLKIRIDGHLISVR
ESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFT
TDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDGPAAFKTIKFSGGEGI
NQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTELDLAQTNYL
RELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHSQVSGGRRSGGRNNG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaattacagaaagtgctggcccgcgctggccacggctcccgccgtgaaatc
gaatctattattgaagccggtcgtgtgagtgttgatggcaaaattgctaaactcggcgat
cgcgttgaagttacccctgggctgaaaattcgtatcgatggtcatctgatttcggtacgt
gagtccgctgaacaaatttgtcgcgttctggcctattacaaaccggaaggtgagttgtgt
acccgtaacgatccggaagggcgtccgacggtgtttgaccgtctgccaaagctgcgtggc
gcacgctggattgccgtaggtcgtctggacgttaacacctgtggtctgctgctgttcacc
accgatggtgaactggcaaaccgtttaatgcatccaagccgtgaagttgaacgtgaatac
gccgtgcgtgtatttggtcaggttgacgacgcgaaactgcgtgatttgagtcgtggcgtg
caactggaagatggtccggcagcttttaaaaccatcaagttcagcggcggcgaagggatc
aaccagtggtacaacgtgactctgaccgaaggccgtaaccgtgaagttcgtcgtctgtgg
gaagcggttggtgtgcaggtgagccgcctgatccgtgttcgttacggtgatatcccactg
ccaaaaggtctgccacgcggtggctggacggagctggacctcgcccagactaactatctg
cgcgaactggtggagcttccgccagaaaccagctctaaagtcgctgtagaaaaagaccgt
cgtcgcatgaaggctaatcagattcgtcgtgcggtgaaacgtcacagtcaggtgagcggc
ggtcgtcgttctggcgggcgtaataacggttaa
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