Shigella boydii Sb227 (serotype 4): SBO_1852
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Entry
SBO_1852 CDS
T00301
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctulonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00541
Biosynthesis of various nucleotide sugars
sbo01100
Metabolic pathways
sbo01250
Biosynthesis of nucleotide sugars
Module
sbo_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SBO_1852 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sbo01005
]
SBO_1852 (kdsA)
Enzymes [BR:
sbo01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
SBO_1852 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
sbo01005
]
Lipid A
SBO_1852 (kdsA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
MjAgo_N-like
Motif
Other DBs
NCBI-ProteinID:
ABB66450
ShiBASE_China:
SBO1852
UniProt:
Q31ZQ8
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Position
complement(1833639..1834493)
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AA seq
284 aa
AA seq
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MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEPSQAQPVADVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGNEKVILCDRGANFGYDNLVVD
MLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRRAQVAELARAGMAVGLAGLFIEA
HPDPEHAKCDGPSALPLAKLEPFLKQMKAIDDLVKGFEELDTSK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaaagtggttagcattggcgacatcaacgtagcaaatgacctgccgttcgta
ctgtttggcggtatgaacgtgctggaatctcgcgatctggcgatgcgcatttgcgagcac
tacgtaactgtgacccagaaactgggtatcccttacgtgttcaaagcctcttttgacaaa
gccaaccgctcctccatccactcttatcgtggaccgggcctggaagaagggatgaaaatc
ttccaagagttgaagcagacttttggcgtgaaaattatcaccgacgttcacgaaccaagt
caggcacagcccgttgctgatgtcgtggatgtgattcagttgccggcgtttcttgctcgc
cagactgacctggttgaagccatggcgaaaaccggtgcggtaattaacgtcaagaaacca
cagtttgtcagcccgggacagatgggtaatatcgttgataaattcaaagaaggcggcaac
gaaaaagtgattctttgcgatcgtggtgctaacttcggctatgacaacctggttgtcgat
atgctgggcttcagcattatgaagaaagtgtctggtaactcgccggtgattttcgacgtg
acccacgcactgcaatgccgcgatccgtttggcgcagcttccggtggtcgtcgtgctcag
gtggctgagctggcacgagccggtatggcggtaggtctggcggggctgtttattgaagcg
catccggatccggaacatgcgaaatgtgatggtccatccgcgctgccgctggctaaactg
gaaccgttcctcaagcagatgaaagcgattgatgatctggtgaaaggtttcgaagaactg
gataccagcaagtaa
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