Shigella boydii Sb227 (serotype 4): SBO_2040
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Entry
SBO_2040 CDS
T00301
Symbol
ycdO
Name
(GenBank) conserved hypothetical protein
KO
K07224
iron uptake system component EfeO
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbo02000
]
SBO_2040 (ycdO)
Transporters [BR:
sbo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SBO_2040 (ycdO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M75
Cupredoxin_1
PSII_Pbs31
Motif
Other DBs
NCBI-ProteinID:
ABB66623
ShiBASE_China:
SBO2040
UniProt:
Q31Z85
LinkDB
All DBs
Position
complement(2007346..2008473)
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AA seq
375 aa
AA seq
DB search
MTINFCRNALQLSVAALFSSAFMANAADVPQVKVTVTDKQCEPMTITVNAGKTQFIIQNH
SQKALEWEILKGVMVVEERENIAPGFSQKMTANLQPGEYDMTCGLLTNPKGKLIVKGEAT
ADAAQSDALLSLGGAITAYKAYVMAETTQLVTDTKAFTDAIKAGDIEKAKALYAPTRQHY
ERIEPIAELFSDLDGSIDAREDDYEQKAADPKFTGFHRLEKALFGDNTTKGMDQYAEQLY
TDVVDLQKRISELAFPPSKVVGGAAGLIEEVAASKISGEEDRYSHTDLWDFQANVEGSQK
IVDLLRPQLQKANPELLAKVDANFKKVDTILAKYRTKDGFETYDKLTDADRNALKGPITA
QAEDLAQLRGVLGLD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaccattaacttctgccgtaacgcattgcagttgagcgtggctgcgctgttttcttct
gcttttatggctaacgccgctgatgtgccgcaggtcaaagtgaccgtgacggataagcag
tgcgaaccgatgaccattacggttaacgccgggaaaacacagttcattattcagaaccat
agccagaaggcgctggagtgggagatcctcaaaggcgtgatggtggtggaagagcgggaa
aatatcgcccctggttttagccagaaaatgacggcgaatttacagcctggcgaatacgat
atgacctgcggtctgctgactaacccgaaagggaagttgatcgtcaaaggtgaggcaacg
gcggatgcggcgcaaagtgatgcgctgttaagtcttggtggtgcaattactgcatataaa
gcgtatgtcatggcggaaaccacgcagctggtgaccgacaccaaagcctttaccgacgcg
attaaagctggcgatatcgaaaaagcgaaagcactgtatgcgccgacgcgccagcactat
gagcgcattgaaccgattgctgaactgttctccgatctggatggcagcattgacgcccgt
gaagatgattacgagcaaaaagccgccgacccaaaattcactggtttccaccgtctggaa
aaagcattgtttggcgacaacaccaccaaagggatggatcagtacgctgagcagctttat
acagatgtggtcgatttgcaaaaacgcatcagtgaactggctttcccaccttcaaaagtg
gtcggcggcgcagccggactgattgaggaagtggcagccagcaaaattagcggtgaagaa
gatcgctacagccacaccgatctgtgggatttccaggctaacgttgaaggctcgcagaaa
attgtcgatttgctgcgtccacaactgcaaaaagccaacccggaactgctggcaaaagtc
gatgccaactttaaaaaggtcgataccattctggcgaaataccgtactaaagacggtttt
gaaacctacgacaaattgaccgatgccgaccggaatgcactgaaaggaccgattactgcg
caggcggaagatctggcgcaacttcgcggtgtgctgggactggattaa
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