Shigella boydii Sb227 (serotype 4): SBO_2191
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Entry
SBO_2191 CDS
T00301
Symbol
ycaO
Name
(GenBank) conserved hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbo03009
]
SBO_2191 (ycaO)
Ribosome biogenesis [BR:
sbo03009
]
Prokaryotic type
ribosomal protein modification factors
SBO_2191 (ycaO)
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SSDB
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GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
ABB66762
ShiBASE_China:
SBO2191
UniProt:
Q31YU6
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Position
complement(2169380..2171149)
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AA seq
589 aa
AA seq
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MIFMTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCF
TNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDV
PEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNL
YVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETL
EAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGL
KDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFA
TLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSL
PGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGD
LEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAV
EAASAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
gtgattttcatgacgcaaacatttatccccggcaaagatgccgctctggaagattccatc
gctcgcttccagcaaaaactttcagacctcggctttcagattgaagaggcctcctggctg
aatcctgtgcctaacgtctggtctgtacatattcgcgacaaagagtgcgcactgtgtttt
accaacggtaaaggcgcaaccaaaaaagcggcgctggcttctgcacttggtgaatatttc
gagcgtctctcaaccaactacttttttgctgatttctggctgggcgaaaccatcgccaac
ggtccgttcgtgcattatcccaacgaaaaatggttcccactgaccgaaaatgacgatgtg
ccagaaggactactcgatgaccgtctgcgcgcgttttatgatccggagaatgaactgacc
ggcagcatgctgattgacctacaatccggtaacgaagatcgtggtatttgcggcctgccg
tttacgcgtcagtccgacaatcagaccgtttatattccgatgaatatcattggtaacctg
tacgtctccaacggtatgtccgcaggtaatacccgcaacgaagcacgcgttcagggattg
tctgaagttttcgaacgctacgtgaaaaaccgcattattgctgaaagcatcagcctgcca
gagatcccggcagacgtgctggcgcgttacccagcggtggttgaagcgatcgaaacactg
gaagcagaaggtttcccgatcttcgcatatgatggttcccttggcggccagtatccggtg
atttgcgtggtactgttcaatcctgctaacggtacctgctttgcctctttcggtgcgcat
cctgattttggcgtagcactggaacgtaccgtgaccgagctgctgcaaggtcgtggcctg
aaagatttggatgtgtttactccgccaaccttcgatgatgaagaagtcgctgaacatacc
aacctcgaaacgcactttatcgattccagcggtttaatctcctgggacctgttcaagcag
gatgccgattatccgtttgtggactggaatttctccggcaccacggaagaagagtttgct
acgctgatggctatcttcaacaaagaagataaagaagtttatattgccgattacgagcat
ctgggcgtttatgcttgccgtattatcgtgcctggcatgtccgatatttatccggctgaa
gatctgtggctcgcgaataacagtatgggcagccatttacgtgaaacgattctttcgcta
ccaggcagcgagtgggaaaaagaagattacctgaacctcatcgagcaactggatgaagaa
ggttttgatgactttacccgcgtgcgtgagctgttgggtctggcgaccgggtcggataac
ggttggtacaccctgcgtatcggtgaattaaaagccatgctggcgctggctggtggcgat
ctggaacaggctctggtctggaccgaatggacgatggagtttaactcatcagtatttagt
ccggaacgcgccaactattatcgctgcctgcaaacgttgttattactggcacaggaagaa
gatcgccagccgctgcaatatctgaatgcgtttgttcgcatgtacggcgcagatgccgtg
gaagccgccagtgcggcaatgagcggcgaagcggcgttttacggcctgcaaccggtagat
agcgatctgcacgcgtttgctgcacatcagtcgttgttgaaggcctacgaaaagctgcag
cgcgccaaagcagcattctgggcaaaataa
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