Shigella boydii Sb227 (serotype 4): SBO_2579
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Entry
SBO_2579 CDS
T00301
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00260
Glycine, serine and threonine metabolism
sbo00460
Cyanoamino acid metabolism
sbo00630
Glyoxylate and dicarboxylate metabolism
sbo00670
One carbon pool by folate
sbo00680
Methane metabolism
sbo01100
Metabolic pathways
sbo01110
Biosynthesis of secondary metabolites
sbo01120
Microbial metabolism in diverse environments
sbo01200
Carbon metabolism
sbo01230
Biosynthesis of amino acids
sbo01240
Biosynthesis of cofactors
sbo04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SBO_2579 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SBO_2579 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SBO_2579 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SBO_2579 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SBO_2579 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SBO_2579 (glyA)
Enzymes [BR:
sbo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SBO_2579 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ABB67122
ShiBASE_China:
SBO2579
UniProt:
Q31XT6
LinkDB
All DBs
Position
complement(2581331..2582584)
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AA seq
417 aa
AA seq
DB search
MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLEPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPKMIIGGFSAYSGV
VDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
AKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVE
VFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS
GIRVGTPAITRRGFKEAEAKELAGWMCDVLDSINDEAVIERIKGKVLDICARYPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgccgaactgtggcaggctatggag
caggaaaaagtacgtcaggaagagcacatcgaactgatcgcctccgaaaactacaccagc
ccgcgcgtaatgcaggcgcagggttctcagctgaccaacaaatatgctgaaggttatccg
ggcaaacgctactacggcggttgcgagtatgttgatatcgttgaacaactggcgatcgat
cgtgcgaaagaactgttcggcgctgactacgctaacgtccagccgcactccggctcccag
gctaactttgcggtctacaccgcgctgctggaaccaggtgataccgttctgggtatgaac
ctggcgcatggcggtcacctgactcacggttctccggttaacttctccggtaaactgtac
aacatcgttccttacggtatcgatgctaccggtcatatcgactacgccgatctggaaaaa
caagccaaagaacacaagccgaaaatgattatcggtggtttctctgcatattccggcgtg
gtggactgggcgaaaatgcgtgaaatcgctgacagcatcggtgcttacctgttcgttgat
atggcgcacgttgcgggcctggttgctgctggcgtctacccgaacccggttcctcatgct
cacgttgttactaccaccactcacaaaaccctggcgggtccgcgcggcggcctgatcctg
gcgaaaggtggtagcgaagagctgtacaaaaaactgaactctgccgttttccctggtggt
cagggcggtccgttgatgcacgtaatcgccggtaaagcggttgctctgaaagaagcgatg
gagcctgagttcaaaacttaccagcagcaggtcgcgaaaaacgctaaagcgatggtagaa
gtgttcctcgagcgcggctacaaagtggtttccggcggcactgataaccacctgttcctg
gttgatctggttgataaaaacctgaccggtaaagaagcagacgccgctctgggccgtgct
aacatcaccgtcaacaaaaacagcgtaccgaacgatccgaagagcccgtttgtgacctcc
ggtattcgcgtgggtactccggcaattacgcgtcgcggcttcaaagaagcagaagcgaaa
gaactggctggctggatgtgtgacgtgctggacagcatcaatgatgaagccgttatcgag
cgcatcaaaggtaaagttctcgacatctgcgcacgttacccggtttacgcataa
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