Shigella boydii Sb227 (serotype 4): SBO_2595
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Entry
SBO_2595 CDS
T00301
Symbol
rnc
Name
(GenBank) RNase III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SBO_2595 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbo03019
]
SBO_2595 (rnc)
03009 Ribosome biogenesis [BR:
sbo03009
]
SBO_2595 (rnc)
03036 Chromosome and associated proteins [BR:
sbo03036
]
SBO_2595 (rnc)
Enzymes [BR:
sbo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SBO_2595 (rnc)
Messenger RNA biogenesis [BR:
sbo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SBO_2595 (rnc)
Ribosome biogenesis [BR:
sbo03009
]
Eukaryotic type
90S particles
RNase
SBO_2595 (rnc)
Prokaryotic type
rRNA processing factors
SBO_2595 (rnc)
Chromosome and associated proteins [BR:
sbo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SBO_2595 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ABB67138
ShiBASE_China:
SBO2595
UniProt:
Q31XS0
LinkDB
All DBs
Position
complement(2600461..2601141)
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AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR
GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcgtaattaatcggcttcaacggaagctgggctacacttttaatcatcag
gaactgttgcagcaggcattaactcatcgtagtgccagcagcaaacataacgagcgttta
gaatttttaggcgactctattctgagctacgttatcgccaatgcgctttatcaccgtttc
cctcgtgtggatgaaggcgatatgagccggatgcgcgccacgctggtccgtggcaatacg
ctggcggaactggcgcgcgaatttgagttaggcgagtgcttacgtttagggcctggtgaa
cttaaaagcggtggatttcgtcgtgagtcaattctcgccgataccgtcgaagcattaatt
ggtggcgtattcctcgacagtgatattcaaaccgtcgagaaattaatcctcaactggtat
caaactcgtttggacgaaattagcccaggcgataaacaaaaagatccgaaaacgcgcttg
caagaatatttgcagggtcgccatctgccgctgccgacttatctggtagtccaggtacgt
ggcgaagcgcacgatcaggaatttactatccactgccaggtcagcggcctgagtgaaccg
gtggttggcacaggttcaagccgtcgtaaggctgagcaggctgccgccgaacaggcgttg
aaaaaactggagctggaatga
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