Shigella boydii Sb227 (serotype 4): SBO_2676
Help
Entry
SBO_2676 CDS
T00301
Symbol
ygdH
Name
(GenBank) conserved hypothetical protein
KO
K06966
pyrimidine/purine-5'-nucleotide nucleosidase [EC:
3.2.2.10
3.2.2.-]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00230
Purine metabolism
sbo00240
Pyrimidine metabolism
sbo01100
Metabolic pathways
sbo01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SBO_2676 (ygdH)
00240 Pyrimidine metabolism
SBO_2676 (ygdH)
Enzymes [BR:
sbo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.10 pyrimidine-5'-nucleotide nucleosidase
SBO_2676 (ygdH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PpnN_C
DUF4478
Lysine_decarbox
LDcluster4
Motif
Other DBs
NCBI-ProteinID:
ABB67213
ShiBASE_China:
SBO2676
UniProt:
Q31XJ5
LinkDB
All DBs
Position
2683006..2684370
Genome browser
AA seq
454 aa
AA seq
DB search
MITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNSGSLTDNSKELLSRFEN
FDINVLRRERGVKLELINPPEEAFVDGRIIRALQANLFAVLRDILFVYGQIHNTVRFPNL
NLDNSVHITNLVFSILRNARALHVGEAPNMVVCWGGHSINENEYLYARRVGNQLGLRELN
ICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPSIIAAEPPNPLVNELIIMPDIEK
RLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPANKDQVLPLILTGPKESADYFRVLD
EFVVHTLGENARRHYRIIIDDAAEVARQMKKSMPLVKENRRDTGDAYSFNWSMRIAPDLQ
MPFEPSHENMANLKLYPDQPVEVLAADLRRAFSGIVAGNVKEVGIRAIEEFGPYKINGDK
EIMRRMDDLLQGFVAQHRMKLPGSAYIPCYEICT
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttgattacacatattagcccgcttggctccatggatatgttgtcgcagctggaagtggat
atgcttaaacgcaccgccagcagcgacctctatcaactgtttcgcaactgttcacttgcc
gtactgaactccggtagtttgaccgataacagcaaagaattgctgtctcgttttgaaaat
ttcgatattaacgtcctgcgccgtgaacgcggcgtaaagctggaactgattaatcccccg
gaagaggcttttgtcgatgggcgaattattcgcgctttgcaggccaacttgttcgcggtc
ctgcgtgacattctcttcgtttacgggcaaatccataacaccgttcgttttcccaacctg
aatctcgacaactccgtccacatcactaacctggtcttttccatcttgcgtaacgctcgc
gcgctgcatgtgggtgaagcgccaaatatggtggtctgctggggcggtcactcaattaac
gaaaacgagtatttgtatgcccgtcgcgtcggaaaccagctgggcctgcgtgagctgaat
atctgcaccggctgtggtccgggagcgatggaagcgccgatgaaaggtgctgcggtcgga
cacgcgcagcagcgttacaaagacagtcgttttattggtatgacagagccgtcgattatc
gccgctgaaccgcctaacccgctggtcaacgaattgatcatcatgccagatatcgaaaaa
cgtctggaagcgtttgtccgtatcgctcacggtatcattatcttccctggcggtgtgggt
acggcagaagagttgctgtatttgctgggaattttaatgaacccggccaacaaagatcag
gttttaccattgatcctcaccggcccgaaagagagcgccgactacttccgcgtactggac
gagtttgtcgtgcatacgctgggtgaaaacgcgcgccgccattaccgcatcatcattgat
gacgccgctgaagtcgctcgtcagatgaaaaaatcgatgccgctggtgaaagaaaatcgc
cgcgacacaggcgatgcctacagctttaactggtcaatgcgcattgcgccagatttgcaa
atgccgtttgagccgtctcacgagaatatggctaatctgaagctttacccggatcaaccc
gttgaagtgctagctgccgacctgcgccgtgcgttctccggtattgtggcgggtaacgta
aaagaagtcggtattcgcgccattgaagagtttggtccttacaaaatcaacggcgataaa
gagattatgcgtcgtatggacgacctgctacagggttttgttgcccagcatcgtatgaag
ttgccaggctcagcctacatcccttgctacgaaatctgcacgtaa
DBGET
integrated database retrieval system
