Shigella boydii Sb227 (serotype 4): SBO_2712
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Entry
SBO_2712 CDS
T00301
Symbol
recC
Name
(GenBank) ATP-dependent dsDNA/ssDNA exonuclease V subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SBO_2712 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbo03400
]
SBO_2712 (recC)
Enzymes [BR:
sbo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SBO_2712 (recC)
DNA repair and recombination proteins [BR:
sbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SBO_2712 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABB67242
ShiBASE_China:
SBO2712
UniProt:
Q31XG6
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All DBs
Position
complement(2721794..2725162)
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AA seq
1122 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI
DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEHEDFTLLRHYLTDDSD
KRKLFQLSSKAADLFDQYLVYRPEWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHELG
QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF
TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL
ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR
SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP
FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA
ARFDITEEGLRYLRLWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA
QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL
PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN
ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL
ISAQQKLYISYIGLSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL
TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF
WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR
FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ
PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL
SQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMM
VRGEGDNIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtctaccattccaatcgtctggacgtgctggaagcgttgatggagtttatt
gtcgaacgcgaacggctggacgatcctttcgaaccagagatgattctggtgcaaagtacc
ggtatggcacagtggctgcaaatgaccctgtcgcaaaagtttggtattgcggcaaacatt
gattttccgctgcctgcgagctttatctgggatatgttcgtccgggtgttaccggagatc
cccaaagagagcgcctttaacaaacagagcatgagctggaaactgatgactctgctgccg
caactgttggagcacgaagactttaccctgttgcggcattatctgactgacgatagcgac
aagcgaaaactgttccagctttcctcaaaagcggcggacctgtttgaccagtatctggtc
tatcgcccggagtggctggcacaatgggaaacaggacatttggttgaagggctgggagaa
gcacaggcctggcaagcgccgttgtggaaggcgctggtggaatatacccatgaactcgga
caaccgcgctggcaccgcgcgaatctctatcagcgctttatcgaaacgctggagtccgcg
acgacctgcccgccggggttaccttcgcgcgtctttatatgcggtatttccgcgttaccg
cctgtttatctccaggcgctccaggcgctgggtaaacatattgaaatccatctcctgttt
accaacccctgccgttattactggggcgatattaaagatcctgcttatctggcgaaactg
ctgactcgtcagcgtcgacacagttttgaagatcgcgaattgccgctatttcgcgatagc
gaaaatgccggacagctctttaacagcgatggtgaacaggatgtcggcaacccgctgctg
gcctcatgggggaagcttgggcgcgactacatttatctcctttctgacctggagagcagc
caggagctggacgcctttgtcgatgtcacgccagataacctgctgcataacattcagtct
gacattctggaactggaaaaccgtgccgttgctggtgtgaacatcgaagagttttcccgt
agcgataacaaacgcccgcttgatccactggatagcagtatcaccttccacgtttgccat
agcccgcagcgtgaagttgaagttttgcacgatcgcctgctggcgatgctggaagaagac
ccgacacttactccgcgcgacatcatcgtgatggtggctgatatcgacagctacagtccg
tttattcaggctgtgtttggtagcgcacctgcggatcgttacctgccttacgccatttcc
gaccgtcgggcgcggcagtcgcatccggtactggaagcgtttatcagcctgttatcgttg
ccagacagccgctttgtgtcggaagacgtgctggcattactggatgtgccggtgctggcg
gcgcggtttgacatcaccgaagaagggctgcgttatttacgcctgtgggtcaacgaatcc
ggcattcgttgggggatagatgacgacaacgttcgcgagctggaactccccgccaccgga
caacacacctggcgatttggcctgacgcgtatgttgctgggctacgcgatggagagcgcg
cagggcgagtggcaatcggttctaccttatgatgagtcgagcggcttaattgcagaactg
gtggggcatctggcttcactgctaatgcagctaaacatctggcgtcgcgggctggcacag
gagcgtccgctagaagagtggttgccggtttgtcgcgatatgctcaacgccttcttcctg
ccggatgcggaaaccgaagcggcgatgacgctgatcgaacaacaatggcaggcgattatc
gccgaaggtttaggtgcgcagtatggcgacgcggtgccgctgtcactattgcgtgatgaa
ctggcacagcgtctggatcaagaacgtatcagccagcgttttctcgccggaccggttaac
atttgtactctgatgccaatgcgttcaattccgttcaaagtggtttgcctgctgggaatg
aacgacggcgtttatccacgtcagcttgcgccattgggctttgacctgatgagccagaaa
ccgaagcgtggcgaccgtagccgtcgcgatgacgaccgctacctgttcctggaagcgtta
atttccgcgcagcaaaaactctatatcagttatatcgggctttccattcaggataacagt
gaacgtttcccgtcggtactggtgcaggaactgatcgactacatcgggcaaagtcattat
ctaccgggcgatgaagcgctcaactgtgatgaaagcgaggcaagggtaaaagcgcatctt
acctgcctccatacccggatgccgtttgatccacaaaactaccagccaggcgaacgacaa
agctatgctcgtgaatggctacctgcggccagccaggctggtaaagcacattctgaattt
gttcagccgctgccgtttaccttaccggaaaccgtgccgctggaaacgctacaacgattc
tgggcacatccggtgcgggcatttttccagatgcgtttgcaggtgaacttccgtaccgaa
gacagcgaaatccccgacaccgagccatttattctggaagggcttagccgttatcaaatc
aatcagcagttattgaatgcactggttgagcaggatgatgccgaacgcttgttccgtcgc
ttccgggcggcaggggatttaccgtatggcgcttttggtgaaattttctgggaaactcag
tgccaggagatgcagcagcttgccgacagagtcattgcctgtcgccagccggggcagagt
atggaaattgatctcgcctgcaacggtgtgcagataactggctggttgccgcaggtgcag
ccggatggcctgttgcgctggcgtccctctttattaagtgtggcgcagggaatgcaactt
tggctggaacaccttgtctactgtgccagcggtggtaatggtgaaagtcgcctttttcta
cgcaaagacggcgagtggcgttttccgccgcttgcagccgaacaggctttgcattacctc
tcacaactgattgaggggtatcgtgaagggatgtccgcgccattgctggtgttacctgaa
agtggcggcgcgtggctaaaaacctgttatgacgcgcaaaacgatgccatgctggatgac
gattccacgttgcaaaaagcccgtacgaaattccttcaggcttacgaaggcaacatgatg
gtgcgtggcgaaggtgataatatctggtatcaaaggctctggcggcaattaacaccagag
acaatggaggccatcgttgaacagtcgcaacgtttcctgttaccgctgtttcgctttaat
cagtcatga
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integrated database retrieval system
