Shigella boydii Sb227 (serotype 4): SBO_2809
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Entry
SBO_2809 CDS
T00301
Symbol
ygaA
Name
(GenBank) putative 2-component transcriptional regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbo03000
]
SBO_2809 (ygaA)
Transcription factors [BR:
sbo03000
]
Prokaryotic type
Helix-turn-helix
Other families
SBO_2809 (ygaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
Mg_chelatase
AAA_5
MCM
AAA
GAF_3
AAA_2
AAA_19
AAA_22
AAA_16
AAA_30
DBD_HTH
HTH_8
Motif
Other DBs
NCBI-ProteinID:
ABB67335
ShiBASE_China:
SBO2809
UniProt:
Q31X73
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All DBs
Position
2819482..2821071
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AA seq
529 aa
AA seq
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MSSQNDYQSNGRYDNIYSQIDSEAKMSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQV
LECDASALLRYDSRQFIPLAIDGLAKGVLGRRFALEGHPRLEAIARAGDVVRFPADSELP
DPYDGLIPGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAG
ALSNALLIEQLESQNMMPGDATPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISG
ETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKF
EMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEV
LAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRLGLSRVVLSAGARNLL
QHYRFPGNVRELEHAIHRAVVLARATRNGDEVILEAQHFAFPEVTLPPPEAAAVPVVKQN
LREATEAFQRETIRQALAQNHHNWAACARMLETDVANLHRLAKRLGMKD
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcaaaatgactatcaatcaaatggtcgatatgacaatatctatagtcaaatt
gacagtgaggcaaagatgagtttttccgttgatgtgctggcgaatatcgccatcgaattg
cagcgtgggattggtcatcaggatcgttttcagcgcctgatcaccacgctacgtcaggtg
ctggagtgcgatgcgtctgcgttgctacgttacgattcgcggcagtttattccgcttgcc
atcgacggtctggcaaagggtgtactcggtagacgctttgcgctggaagggcatccacgg
ctggaagcgattgcccgcgccggggatgtggtgcgctttcccgcagacagcgaattgccc
gatccctatgacggtttgattcctgggcaggagagtctgaaggttcacgcctgcgttggt
ctgccattgtttgccgggcaaaacctgatcggcgcactgacgctcgacgggatgcagccc
gatcagttcgatgttttcagcgacgaagagctacggctgattgctgcgctggcggcggga
gcgttaagcaatgcgttgctgattgaacaactggaaagccagaatatgatgccaggcgat
gccacgccgtttgaagcggtgaaacagacgcagatgattggcttgtcccctggcatgacg
caactgaaaaaagagattgagattgtggcggcgtccgatctcaacgtcctgatcagcggt
gagacgggaaccggtaaggagctggtggcgaaagcgattcatgaagcctcgccacgggcg
gtgaatccgctggtctatctcaactgtgctgcactgccggaaagtgtggcggaaagtgag
ttgttcgggcatgtgaaaggagcgtttactggcgctatcagtaaccgcagcgggaagttt
gaaatggcggataacggcactctgtttctggatgagatcggcgagttgtcgttggcattg
caggccaagctgctgagggtgttgcagtatggcgatattcagcgcgttggcgatgaccgt
agtttgcgggtcgatgtgcgcgtgctggcggcgactaaccgcgacttacgcgaagaggtg
ctggcagggcgatttcgcgctgacttgtttcatcgcctgagcgtgtttccactttcggtg
ccgccgctgcgtgagcggggcgatgatgtcattctgctggcggggtatttctgcgaacag
tgtcgtttgcggctggggctctcccgcgtggtattaagtgccggagcgcgaaatttactg
caacactatcgttttccggggaacgtgcgcgaactggaacatgctattcatcgggcggta
gtgctggcgagagccacccgcaacggcgatgaagtgattcttgaggcgcaacattttgct
tttcctgaggtgacgttgccgccgccagaagcggcggcggtgcccgttgttaagcaaaac
ctgcgtgaagcgacagaagcgttccagcgtgaaactattcgccaggcactggcacaaaat
catcataactgggctgcctgcgcgcggatgctggaaaccgacgtcgccaacctgcatcgg
ctggcgaaacgtctgggaatgaaggattaa
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integrated database retrieval system
