Shigella boydii Sb227 (serotype 4): SBO_2922
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Entry
SBO_2922 CDS
T00301
Symbol
ygjD
Name
(GenBank) putative O-sialoglycoprotein endopeptidase
KO
K25706
tRNA N6-adenosine threonylcarbamoyltransferase [EC:
2.3.1.234
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbo03016
]
SBO_2922 (ygjD)
Enzymes [BR:
sbo01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.234 N6-L-threonylcarbamoyladenine synthase
SBO_2922 (ygjD)
Transfer RNA biogenesis [BR:
sbo03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SBO_2922 (ygjD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
TsaD
HypF_C_2
BcrAD_BadFG
Carbam_trans_N
DUF6799
TrwC
Motif
Other DBs
NCBI-ProteinID:
ABB67438
ShiBASE_China:
SBO2922
UniProt:
Q31WX0
LinkDB
All DBs
Position
complement(2924722..2925735)
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AA seq
337 aa
AA seq
DB search
MRVLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQ
AALKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAWNVPAIPVHHMEGHLLAPM
LEDNPPEFPFVALLVSGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAKLLGLDYPGG
PLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRDNGTDDQTRADIARAFE
DAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLRAKLAEMMKKRRGEVFYARPEFCTD
NGAMIAYAGMVRFKAGATADLGVSVRPRWPLAELPAA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtactgggtattgaaacttcctgcgatgaaaccggcatcgccatttacgacgat
gaaaaaggtttgttagccaaccaattgtatagtcaggtgaaattgcacgctgactacggc
ggcgtcgtgcctgaactggcctcccgcgatcacgtgcgcaaaaccgtaccgttgatccag
gcggcgctaaaggagtctggcttaacggcaaaagacattgatgctgtggcctataccgca
ggccctggattagtcggcgcactgctggttggcgcaaccgtggggcgttctctggcgttt
gcctggaacgttccggcaatcccggtacaccatatggaagggcatctgttagcgccgatg
ctggaagataacccgccggaatttccgtttgtcgcgctgctggtgtccggcggtcatacg
cagttaatcagcgtgactggcattggtcagtacgagctgctcggcgagtctatcgatgat
gccgccggtgaagcgtttgataaaaccgcgaagctgctggggctggattatcctggcgga
ccgttactgtcgaaaatggcggctcagggtactgccgggcgctttgttttcccgcgtccg
atgaccgaccgtccggggctggatttcagcttttctggtctgaaaacctttgcggcgaac
acgattcgtgacaacggcaccgacgaccagacgcgtgctgatatcgcccgcgcctttgaa
gatgcggtggtcgatacgttgatgattaagtgtaagcgagcgttggatcagacgggcttt
aagcgactggtcatggcgggcggcgtgagtgctaaccgcacgttacgggcgaagctggcg
gaaatgatgaaaaaacgccgcggcgaagtgttctacgcgcgtccggagttttgtactgat
aacggcgcgatgatcgcctatgccggaatggtgcggtttaaagcaggcgcgacggcggat
ctcggcgttagcgtgcgtccgcgctggccgctggcggagttaccggctgcgtaa
DBGET
integrated database retrieval system
